RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CCNE1P24864 410 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 RXRBP28702 533 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 MIIPQ5JXC2 388 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 ZNF662Q6ZS27 426 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 SRLQ86TD4 932 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 AK8Q96MA6 479 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 EIF3CQ99613 913 aaKnown RBP13.89□□□□□ -0.19
RNF4-222ENST00000541204 VIPAS39Q9H9C1 493 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 SLC39A2Q9NP94 309 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 PI4KBQ9UBF8 816 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 PLEKP08567 350 aaPredicted RBP13.89□□□□□ -0.19
RNF4-222ENST00000541204 ERCC3P19447 782 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
RNF4-222ENST00000541204 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 SLFN13Q68D06 897 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 KRT26Q7Z3Y9 468 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 CCDC170Q8IYT3 715 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 SPICE1Q8N0Z3 855 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
RNF4-222ENST00000541204 CUL5Q93034 780 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
RNF4-222ENST00000541204 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
RNF4-222ENST00000541204 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 ZNF263O14978 683 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 PPIP5K2O43314 1243 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 IVLP07476 585 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 MCM3P25205 808 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 JAG1P78504 1218 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 ICA1Q05084 483 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 USH1GQ495M9 461 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 RETREG2Q8NC44 543 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 PRMT6Q96LA8 375 aaPredicted RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 MTMR9Q96QG7 549 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 RIC8AQ9NPQ8 531 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 CLRN2A0PK11 232 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 TARSL2A2RTX5 802 aaKnown RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
RNF4-222ENST00000541204 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 GRB10Q13322 594 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 SNX29Q8TEQ0 813 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 DDX25Q9UHL0 483 aaKnown RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 SLC20A2Q08357 652 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 CCDC17Q96LX7 622 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
RNF4-222ENST00000541204 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
RNF4-222ENST00000541204 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 VGLL3A8MV65 326 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 RAD17O75943 681 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 PRPF6O94906 941 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 SSBP05455 408 aaKnown RBP eCLIP13.87□□□□□ -0.19
RNF4-222ENST00000541204 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 FAM114A1Q8IWE2 563 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 CCDC47Q96A33 483 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 DHX36Q9H2U1 1008 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 CUEDC2Q9H467 287 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 PLEKHA4Q9H4M7 779 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 YDJCA8MPS7 323 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 hCG_1984214I3L0E3 225 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 GH2P01242 217 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 GGCXP38435 758 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 VAV2P52735 878 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 ZNF713Q8N859 430 aaPredicted RBP13.87□□□□□ -0.19
RNF4-222ENST00000541204 KIAA0895Q8NCT3 520 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 AFAP1L1Q8TED9 768 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 EHD4Q9H223 541 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
RNF4-222ENST00000541204 SLX4Q8IY92 1834 aa13.86□□□□□ -0.19
RNF4-222ENST00000541204 MYMKA6NI61 221 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms