RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ZBED6P86452 979 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 APBA1Q02410 837 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 VWA3BQ502W6 1294 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 NELFCDQ8IXH7 590 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 CUL5Q93034 780 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 MRIQ9BWK5 157 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 NDST4Q9H3R1 872 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 ZNHIT6Q9NWK9 470 aaKnown RBP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 H0YIN7 160 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 AOC3Q16853 763 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-214ENST00000540113 C7orf43Q8WVR3 580 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 DRC1Q96MC2 740 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 GDF11O95390 407 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 HDLBPQ00341 1268 aaKnown RBP12.8□□□□□ -0.36
C11orf54-214ENST00000540113 SEPT2Q15019 361 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 WHAMMP3Q1A5X7 153 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 BEND6Q5SZJ8 279 aaPredicted RBP12.8□□□□□ -0.36
C11orf54-214ENST00000540113 TATDN1Q6P1N9 297 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 TRAPPC11Q7Z392 1133 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 MKL1Q969V6 931 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 TANGO6Q9C0B7 1094 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 ARHGAP20Q9P2F6 1191 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 KIAA1024Q9UPX6 916 aa12.8□□□□□ -0.36
C11orf54-214ENST00000540113 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 CCDC151A5D8V7 595 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 POTECB2RU33 542 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 ZMYND10O75800 440 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-214ENST00000540113 JAG1P78504 1218 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 COASYQ13057 564 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PDIA5Q14554 519 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
C11orf54-214ENST00000540113 TMEM119Q4V9L6 283 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 P2RX7Q99572 595 aaKnown RBP12.79□□□□□ -0.36
C11orf54-214ENST00000540113 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
C11orf54-214ENST00000540113 MLXIPQ9HAP2 919 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 SIK3Q9Y2K2 1263 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PVALEFA0A1B0GWK0 134 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PSMD14O00487 310 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 N4BP1O75113 896 aaKnown RBP12.79□□□□□ -0.36
C11orf54-214ENST00000540113 KRT83P78385 493 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 BRD3Q15059 726 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 USH1GQ495M9 461 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 ANKRD13CQ8N6S4 541 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 DNAJC19Q96DA6 116 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 CCDC42Q96M95 316 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 RAB34Q9BZG1 259 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 UBXN6Q9BZV1 441 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PI4KBQ9UBF8 816 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 PCDHA1Q9Y5I3 950 aa12.79□□□□□ -0.36
C11orf54-214ENST00000540113 KIF20AO95235 890 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 GUF1Q8N442 669 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 DCAF4Q8WV16 495 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 PSMB7Q99436 277 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 PSME4Q14997 1843 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 PDE2AO00408 941 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 TRAF5O00463 557 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 MEIS1O00470 390 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 KRT86O43790 486 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 SLC1A4P43007 532 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 MRPS25P82663 173 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 SLC30A10Q6XR72 485 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 GDAP1L1Q96MZ0 367 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
C11orf54-214ENST00000540113 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
C11orf54-214ENST00000540113 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms