RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SCG5P05408 212 aa8.6□□□□□ -1.03
CCDC7-209ENST00000539197 GRIA2P42262 883 aa8.6□□□□□ -1.03
CCDC7-209ENST00000539197 CPZQ66K79 652 aa8.6□□□□□ -1.03
CCDC7-209ENST00000539197 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
CCDC7-209ENST00000539197 ZNF536O15090 1300 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 CPP00450 1065 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC7-209ENST00000539197 GFRA1P56159 465 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 CHRNA2Q15822 529 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 LIMS2Q7Z4I7 341 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 C1orf159Q96HA4 380 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 LCORQ96JN0 433 aaPredicted RBP8.59□□□□□ -1.03
CCDC7-209ENST00000539197 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 ZNF652Q9Y2D9 606 aa8.59□□□□□ -1.03
CCDC7-209ENST00000539197 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
CCDC7-209ENST00000539197 ACBD5Q5T8D3 534 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-209ENST00000539197 PRAMEF18Q5VWM3 479 aa8.58□□□□□ -1.04
CCDC7-209ENST00000539197 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-209ENST00000539197 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
CCDC7-209ENST00000539197 RBPJLQ9UBG7 517 aa8.58□□□□□ -1.04
CCDC7-209ENST00000539197 TCRBV5S2A0A599 114 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 HGSO14964 777 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-209ENST00000539197 LTBRP36941 435 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 TESK1Q15569 626 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 GLB1LQ6UWU2 654 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 CHST13Q8NET6 341 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 TOE1Q96GM8 510 aaKnown RBP8.57□□□□□ -1.04
CCDC7-209ENST00000539197 C1QTNF3Q9BXJ4 246 aa8.57□□□□□ -1.04
CCDC7-209ENST00000539197 H7BY64 318 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 B4GALT3O60512 393 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 CAPNS1P04632 268 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 ZNF20P17024 532 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 ZNF28P17035 718 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 MLLT6P55198 1093 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-209ENST00000539197 LSAMPQ13449 338 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 STEAP3Q658P3 488 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 VPS37DQ86XT2 251 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 ST6GALNAC2Q9UJ37 374 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 PCDHB4Q9Y5E5 795 aa8.56□□□□□ -1.04
CCDC7-209ENST00000539197 C1QTNF3-AMACRE9PGA6 284 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 TADA3O75528 432 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 GJB6O95452 261 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 LRG1P02750 347 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
CCDC7-209ENST00000539197 TNFRSF1AP19438 455 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 SURF1Q15526 300 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 TEPPQ6URK8 271 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC7-209ENST00000539197 CLIC6Q96NY7 704 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 L2HGDHQ9H9P8 463 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 DTLQ9NZJ0 730 aa8.55□□□□□ -1.04
CCDC7-209ENST00000539197 MSCO60682 206 aa8.54□□□□□ -1.04
CCDC7-209ENST00000539197 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
CCDC7-209ENST00000539197 IL13P35225 146 aa8.54□□□□□ -1.04
CCDC7-209ENST00000539197 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
CCDC7-209ENST00000539197 PLEKHH3Q7Z736 793 aa8.54□□□□□ -1.04
CCDC7-209ENST00000539197 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
CCDC7-209ENST00000539197 MATN3O15232 486 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 CYP7B1O75881 506 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 ZXDAP98168 799 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 FXNQ16595 210 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 EMC4Q5J8M3 183 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 PHF19Q5T6S3 580 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 TMC5Q6UXY8 1006 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
CCDC7-209ENST00000539197 ZCCHC14Q8WYQ9 949 aaKnown RBP8.53□□□□□ -1.04
CCDC7-209ENST00000539197 MBD6Q96DN6 1003 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 JAM3Q9BX67 310 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 TMEM168Q9H0V1 697 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 PPP4R1LQ9P1A2 415 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
CCDC7-209ENST00000539197 LAMTOR5O43504 91 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 DGKIO75912 1065 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 PPP2R2AP63151 447 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 DVL3Q92997 716 aaPredicted RBP8.52□□□□□ -1.05
CCDC7-209ENST00000539197 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC7-209ENST00000539197 ST7Q9NRC1 585 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 NPFFR2Q9Y5X5 522 aa8.52□□□□□ -1.05
CCDC7-209ENST00000539197 A0A1W2PQU0 124 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
CCDC7-209ENST00000539197 WRNIP1Q96S55 665 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 TMEM209Q96SK2 561 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 EPB41L1Q9H4G0 881 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
CCDC7-209ENST00000539197 FGRP09769 529 aa8.5□□□□□ -1.05
CCDC7-209ENST00000539197 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
CCDC7-209ENST00000539197 PTPN18Q99952 460 aa8.5□□□□□ -1.05
CCDC7-209ENST00000539197 IER2Q9BTL4 223 aa8.5□□□□□ -1.05
CCDC7-209ENST00000539197 MAFKO60675 156 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 GRIN1Q05586 938 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 ICAM4Q14773 271 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms