RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 SEMA6BQ9H3T3 888 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 NOD1Q9Y239 953 aa17.25■□□□□ 0.35
RAB40B-202ENST00000538809 MEIS2O14770 477 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 FGBP02675 491 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 CPA1P15085 419 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 PBX2P40425 430 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 PTGISQ16647 500 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 UBE2SQ16763 222 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 KCNV1Q6PIU1 500 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 SYNE3Q6ZMZ3 975 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 DEFB128Q7Z7B8 93 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 VWCEQ96DN2 955 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 EYSQ5T1H1 3165 aa17.24■□□□□ 0.35
RAB40B-202ENST00000538809 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 F2P00734 622 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 MFSD10Q14728 455 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 RTN1Q16799 776 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 KIAA0753Q2KHM9 967 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 HEATR3Q7Z4Q2 680 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 MYLIPQ8WY64 445 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 CDX2Q99626 313 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-202ENST00000538809 KATNAL1Q9BW62 490 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 SNX14Q9Y5W7 946 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 SIP14410 1827 aa17.23■□□□□ 0.35
RAB40B-202ENST00000538809 WDR81Q562E7 1941 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 GOLGA8BA8MQT2 603 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 ZBBXA8MT70 800 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 ZBTB43O43298 467 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 HOXD8P13378 290 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 SESTD1Q86VW0 696 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 C7orf31Q8N865 590 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 DHX38Q92620 1227 aaKnown RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 TIFAQ96CG3 184 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 PBX4Q9BYU1 374 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 MTIF3Q9H2K0 278 aaKnown RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 GTF2IRD1Q9UHL9 959 aa17.22■□□□□ 0.35
RAB40B-202ENST00000538809 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-202ENST00000538809 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 RBAK-RBAKDNI3L0D1 243 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 HAS3O00219 553 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 STAM2O75886 525 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 REC8O95072 547 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
RAB40B-202ENST00000538809 TGFB3P10600 412 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 FUT2Q10981 343 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 BFSP2Q13515 415 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 PCNX4Q63HM2 1172 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 RETREG2Q8NC44 543 aa17.21■□□□□ 0.35
RAB40B-202ENST00000538809 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
RAB40B-202ENST00000538809 TMEM265A0A087WTH1 108 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 FIBPO43427 364 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 ICAM3P32942 547 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 RCAN1P53805 252 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 FGD1P98174 961 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-202ENST00000538809 SP4Q02446 784 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 CYFIP1Q7L576 1253 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 FBXL16Q8N461 479 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-202ENST00000538809 TELO2Q9Y4R8 837 aa17.2■□□□□ 0.34
RAB40B-202ENST00000538809 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
RAB40B-202ENST00000538809 PPFIA4O75335 1185 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 LGALS2P05162 132 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-202ENST00000538809 PFKMP08237 780 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 CDC27P30260 824 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 RABGGTBP53611 331 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 HIC1Q14526 733 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 GRIN2CQ14957 1233 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 NKX2-4Q9H2Z4 354 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms