RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 PRRC2BQ5JSZ5 2229 aaKnown RBP26.5■■□□□ 1.83
PKP3-210ENST00000533249 ERICH2A1L162 156 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 HAS3O00219 553 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 TLL1O43897 1013 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 GGPS1O95749 300 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 WDR5P61964 334 aaKnown RBP26.5■■□□□ 1.83
PKP3-210ENST00000533249 RBL2Q08999 1139 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 TMCO2Q7Z6W1 182 aaPredicted RBP26.5■■□□□ 1.83
PKP3-210ENST00000533249 RALYLQ86SE5 291 aaKnown RBP26.5■■□□□ 1.83
PKP3-210ENST00000533249 VSIG10LQ86VR7 867 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 FCHSD1Q86WN1 690 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 SPATA33Q96N06 139 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 MTCH2Q9Y6C9 303 aa26.5■■□□□ 1.83
PKP3-210ENST00000533249 GCOM1H8Y6P7 765 aaPredicted RBP26.49■■□□□ 1.83
PKP3-210ENST00000533249 RBAK-RBAKDNI3L0D1 243 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 POLR2MP0CAP2 368 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 CHMLP26374 656 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 ZNF200P98182 395 aaPredicted RBP26.49■■□□□ 1.83
PKP3-210ENST00000533249 CELF3Q5SZQ8 465 aaKnown RBP26.49■■□□□ 1.83
PKP3-210ENST00000533249 MYSM1Q5VVJ2 828 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 KCNV1Q6PIU1 500 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 SAMD3Q8N6K7 520 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 RIOX1Q9H6W3 641 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 TAF6LQ9Y6J9 622 aa26.49■■□□□ 1.83
PKP3-210ENST00000533249 NBNO60934 754 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 PARNO95453 639 aaKnown RBP26.48■■□□□ 1.83
PKP3-210ENST00000533249 CCND2P30279 289 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 TRAF1Q13077 416 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 PTK7Q13308 1070 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 WTAPQ15007 396 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 HSDL1Q3SXM5 330 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 KRT40Q6A162 431 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 CNKSR3Q6P9H4 555 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 UHRF1Q96T88 793 aaPredicted RBP26.48■■□□□ 1.83
PKP3-210ENST00000533249 ZBED2Q9BTP6 218 aa26.48■■□□□ 1.83
PKP3-210ENST00000533249 CYTH3O43739 400 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 PPFIA4O75335 1185 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 HOXD8P13378 290 aaPredicted RBP26.47■■□□□ 1.83
PKP3-210ENST00000533249 UBA1P22314 1058 aaKnown RBP26.47■■□□□ 1.83
PKP3-210ENST00000533249 DEFB103AP81534 67 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 SP2Q02086 613 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 TFF2Q03403 129 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 TCTN1Q2MV58 587 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 SPRED2Q7Z698 418 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 NCOA7Q8NI08 942 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 PIBF1Q8WXW3 757 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 GPKOWQ92917 476 aaPredicted RBP eCLIP26.47■■□□□ 1.83
PKP3-210ENST00000533249 WNT8BQ93098 351 aa26.47■■□□□ 1.83
PKP3-210ENST00000533249 PNMA6FA0A0J9YX94 578 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 LCHNA4D1U4 455 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 E7EWF7 191 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 CXCL10P02778 98 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 POU3F3P20264 500 aaPredicted RBP26.46■■□□□ 1.83
PKP3-210ENST00000533249 SART3Q15020 963 aaKnown RBP26.46■■□□□ 1.83
PKP3-210ENST00000533249 TRIM71Q2Q1W2 868 aaKnown RBP26.46■■□□□ 1.83
PKP3-210ENST00000533249 ZNF618Q5T7W0 954 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 MLXIPQ9HAP2 919 aa26.46■■□□□ 1.83
PKP3-210ENST00000533249 TROAPQ12815 778 aa26.45■■□□□ 1.82
PKP3-210ENST00000533249 HIC1Q14526 733 aa26.45■■□□□ 1.82
PKP3-210ENST00000533249 TCF20Q9UGU0 1960 aaKnown RBP26.45■■□□□ 1.82
PKP3-210ENST00000533249 TGFB3P10600 412 aa26.44■■□□□ 1.82
PKP3-210ENST00000533249 TRAF7Q6Q0C0 670 aa26.44■■□□□ 1.82
PKP3-210ENST00000533249 CATIPQ7Z7H3 387 aa26.44■■□□□ 1.82
PKP3-210ENST00000533249 TRANK1O15050 2925 aa26.44■■□□□ 1.82
PKP3-210ENST00000533249 ABHD14A-ACY1A0A1B0GW23 586 aa26.43■■□□□ 1.82
PKP3-210ENST00000533249 GRB10Q13322 594 aa26.43■■□□□ 1.82
PKP3-210ENST00000533249 NECAB3Q96P71 396 aaPredicted RBP26.43■■□□□ 1.82
PKP3-210ENST00000533249 C16orf70Q9BSU1 422 aa26.43■■□□□ 1.82
PKP3-210ENST00000533249 BCAS3Q9H6U6 928 aa26.43■■□□□ 1.82
PKP3-210ENST00000533249 REV3LO60673 3130 aa26.43■■□□□ 1.82
PKP3-210ENST00000533249 COL4A4P53420 1690 aaPredicted RBP26.42■■□□□ 1.82
PKP3-210ENST00000533249 SGSM2O43147 1006 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 KCNQ1P51787 676 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 ANTXR2P58335 489 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 IKBKEQ14164 716 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 MBTPS1Q14703 1052 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 AAK1Q2M2I8 961 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 FAM117BQ6P1L5 589 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 MUC3AQ02505 3323 aa26.42■■□□□ 1.82
PKP3-210ENST00000533249 BMP1P13497 986 aa26.41■■□□□ 1.82
PKP3-210ENST00000533249 THPOP40225 353 aa26.41■■□□□ 1.82
PKP3-210ENST00000533249 GNPTABQ3T906 1256 aa26.41■■□□□ 1.82
PKP3-210ENST00000533249 MTUS1Q9ULD2 1270 aa26.41■■□□□ 1.82
PKP3-210ENST00000533249 NCOR1O75376 2440 aa26.41■■□□□ 1.82
PKP3-210ENST00000533249 C17orf102A2RUQ5 167 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 H3BRB1 525 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 NOP56O00567 594 aaKnown RBP26.4■■□□□ 1.82
PKP3-210ENST00000533249 EFCAB14O75071 495 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 GJB5O95377 273 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 MRPS9P82933 396 aaKnown RBP26.4■■□□□ 1.82
PKP3-210ENST00000533249 SERINC5Q86VE9 423 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 IGDCC4Q8TDY8 1250 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 GDPD5Q8WTR4 605 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 MYL10Q9BUA6 226 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 TUT1Q9H6E5 874 aaKnown RBP26.4■■□□□ 1.82
PKP3-210ENST00000533249 RTEL1Q9NZ71 1219 aa26.4■■□□□ 1.82
PKP3-210ENST00000533249 LPXNO60711 386 aa26.39■■□□□ 1.82
PKP3-210ENST00000533249 LGR5O75473 907 aa26.39■■□□□ 1.82
PKP3-210ENST00000533249 LGALS2P05162 132 aa26.39■■□□□ 1.82
PKP3-210ENST00000533249 MB21D2Q8IYB1 491 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms