RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
CAPN1-223ENST00000533079 CHST3Q7LGC8 479 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 SERINC5Q86VE9 423 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
CAPN1-223ENST00000533079 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-223ENST00000533079 ALG1Q9BT22 464 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 LMAN2LQ9H0V9 348 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 INCENPQ9NQS7 918 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
CAPN1-223ENST00000533079 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 RSPH10B2B2RC85 870 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
CAPN1-223ENST00000533079 RSPH10BP0C881 870 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 ZNF286BP0CG31 522 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 GPM6BQ13491 265 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 SMAD2Q15796 467 aaKnown RBP14.54□□□□□ -0.08
CAPN1-223ENST00000533079 PKN1Q16512 942 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 HERC4Q5GLZ8 1057 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-223ENST00000533079 TCEAL5Q5H9L2 206 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 KCNV1Q6PIU1 500 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 HFE2Q6ZVN8 426 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 TICAM2Q86XR7 235 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 DBF4BQ8NFT6 615 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 APBB2Q92870 758 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 TOP1MTQ969P6 601 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 RMDN3Q96TC7 470 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 PRRX2Q99811 253 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 RWDD3Q9Y3V2 267 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 BRWD1Q9NSI6 2320 aa14.54□□□□□ -0.08
CAPN1-223ENST00000533079 PPFIA4O75335 1185 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 CDC37Q16543 378 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-223ENST00000533079 RRP12Q5JTH9 1297 aaKnown RBP14.53□□□□□ -0.08
CAPN1-223ENST00000533079 ARHGEF16Q5VV41 709 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 TMEM192Q8IY95 271 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 SEPT8Q92599 483 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 WNT8BQ93098 351 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 CLDND1Q9NY35 253 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 USP34Q70CQ2 3546 aa14.53□□□□□ -0.08
CAPN1-223ENST00000533079 CCDC171Q6TFL3 1326 aa14.52□□□□□ -0.08
CAPN1-223ENST00000533079 C5orf67F2Z3F1 127 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 MX1P20591 662 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 HOXC8P31273 242 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 IRS1P35568 1242 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 THPOP40225 353 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 CTC1Q2NKJ3 1217 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 VPS53Q5VIR6 699 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 BMP8AQ7Z5Y6 402 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 RPAINQ86UA6 219 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 TAAR1Q96RJ0 339 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 C11orf84Q9BUA3 381 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-223ENST00000533079 PXMP2Q9NR77 195 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 COL20A1Q9P218 1284 aa14.52□□□□□ -0.09
CAPN1-223ENST00000533079 MRPL11Q9Y3B7 192 aaKnown RBP14.52□□□□□ -0.09
CAPN1-223ENST00000533079 C17orf102A2RUQ5 167 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 RB1P06400 928 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 HSPD1P10809 573 aaKnown RBP14.51□□□□□ -0.09
CAPN1-223ENST00000533079 PTPN5P54829 565 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 GHRHRQ02643 423 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 SMAD4Q13485 552 aaKnown RBP14.51□□□□□ -0.09
CAPN1-223ENST00000533079 CCDC178Q5BJE1 867 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 EP400NLQ6ZTU2 488 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 DGKHQ86XP1 1220 aa14.51□□□□□ -0.09
CAPN1-223ENST00000533079 IFIH1Q9BYX4 1025 aaKnown RBP14.51□□□□□ -0.09
CAPN1-223ENST00000533079 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
CAPN1-223ENST00000533079 MAP3K20Q9NYL2 800 aaKnown RBP14.51□□□□□ -0.09
CAPN1-223ENST00000533079 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 C5orf42Q9H799 3197 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 MBTPS2O43462 519 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ST18O60284 1047 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 FGAP02671 866 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 NR3C2P08235 984 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 TGFB3P10600 412 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 EIF2AK2P19525 551 aaKnown RBP14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ASPRV1Q53RT3 343 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 CELF3Q5SZQ8 465 aaKnown RBP14.5□□□□□ -0.09
CAPN1-223ENST00000533079 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 MFSD6Q6ZSS7 791 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ESR2Q92731 530 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ATP6V0A1Q93050 837 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 EVI5LQ96CN4 794 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 SPATA33Q96N06 139 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ATG2AQ2TAZ0 1938 aa14.5□□□□□ -0.09
CAPN1-223ENST00000533079 ZNF318Q5VUA4 2279 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 GNAT1P11488 350 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 CTNNB1P35222 781 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 LTBRP36941 435 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 HSD17B4P51659 736 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 ZNF200P98182 395 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-223ENST00000533079 HSDL1Q3SXM5 330 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 FIBCD1Q8N539 461 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 SAMD3Q8N6K7 520 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 PNMA1Q8ND90 353 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 EDAQ92838 391 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 C16orf70Q9BSU1 422 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 MUTYHQ9UIF7 546 aa14.49□□□□□ -0.09
CAPN1-223ENST00000533079 TRIOO75962 3097 aa14.48□□□□□ -0.09
CAPN1-223ENST00000533079 ADGRA3Q8IWK6 1321 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms