RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 GOLGA6L10A0A0M3HER8 536 aa17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 PEX3P56589 373 aa17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 PPM1KQ8N3J5 372 aa17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 POLR1AO95602 1720 aaPredicted RBP17.31■□□□□ 0.36
PPFIA1-222ENST00000532504 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 KCNJ18B7U540 433 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 ATF7P17544 494 aaPredicted RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 PRELPP51888 382 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 KCNJ12Q14500 433 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 BAG1Q99933 345 aaPredicted RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 RIOK1Q9BRS2 568 aaKnown RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 COMMD10Q9Y6G5 202 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 GNA14O95837 355 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 PRPHP41219 470 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 RRAGAQ7L523 313 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 GSTA5Q7RTV2 222 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 DYDC2Q96IM9 177 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 PARVGQ9HBI0 331 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 ZNF302Q9NR11 478 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 YY1P25490 414 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 CCDC97Q96F63 343 aaPredicted RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 C1orf112Q9NSG2 853 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 SRPRBQ9Y5M8 271 aaKnown RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 SPOPO43791 374 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 NR2F2P24468 414 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 RCAN1P53805 252 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 DCUN1D2Q6PH85 259 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
PPFIA1-222ENST00000532504 GAP43P17677 238 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 KRT76Q01546 638 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 KLHL30Q0D2K2 578 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 STK17AQ9UEE5 414 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 K7ERI5 159 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 GNAT1P11488 350 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 LIN9Q5TKA1 542 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 ZBBXA8MT70 800 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 SELENOOQ9BVL4 669 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 USTQ9Y2C2 406 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 KIAA1841Q6NSI8 718 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
PPFIA1-222ENST00000532504 ARPP19P56211 112 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 DDIT3P35638 169 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 ANTXR2P58335 489 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 RBM10P98175 930 aaKnown RBP17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 IFFO1Q0D2I5 559 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 CAPZA3Q96KX2 299 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 SLFN14P0C7P3 912 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 CYFIP1Q7L576 1253 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 MAK16Q9BXY0 300 aaKnown RBP17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 PIK3CAP42336 1068 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 CPA4Q9UI42 421 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 RCOR1Q9UKL0 485 aa17.28■□□□□ 0.36
PPFIA1-222ENST00000532504 POTEB3A0JP26 581 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 POTECB2RU33 542 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 E9PMD0 336 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 POTEBQ6S5H4 581 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 THNSL1Q8IYQ7 743 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 NUDT12Q9BQG2 462 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 CTTNBP2NLQ9P2B4 639 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 MYO1AQ9UBC5 1043 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.36
PPFIA1-222ENST00000532504 UQCRHLA0A096LP55 91 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 DAPK3O43293 454 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 GGPS1O95749 300 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 UQCRHP07919 91 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 BACE1P56817 501 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 YWHAEP62258 255 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms