RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 CMTR1Q8N1G2 835 aaKnown RBP10.85□□□□□ -0.67
VPS26B-207ENST00000532160 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
VPS26B-207ENST00000532160 MTG1Q9BT17 334 aaPredicted RBP10.85□□□□□ -0.67
VPS26B-207ENST00000532160 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
VPS26B-207ENST00000532160 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
VPS26B-207ENST00000532160 THEGQ9P2T0 379 aa10.85□□□□□ -0.67
VPS26B-207ENST00000532160 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
VPS26B-207ENST00000532160 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 KIAA1217Q5T5P2 1943 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 BRWD1Q9NSI6 2320 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 ZBTB43O43298 467 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 PARP1P09874 1014 aaKnown RBP10.84□□□□□ -0.67
VPS26B-207ENST00000532160 SUPT20HL2P0C7V6 817 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 GRM4Q14833 912 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 FAM47CQ5HY64 1035 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 CCDC82Q8N4S0 544 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 SCFD2Q8WU76 684 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
VPS26B-207ENST00000532160 NCOA5Q9HCD5 579 aaKnown RBP10.84□□□□□ -0.67
VPS26B-207ENST00000532160 MAD2L2Q9UI95 211 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 PCDHA11Q9Y5I1 949 aa10.84□□□□□ -0.67
VPS26B-207ENST00000532160 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 A6NJR5 290 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 NKRFO15226 690 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS26B-207ENST00000532160 DDAH1O94760 285 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 PLEKHA8P1O95397 391 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 CA3P07451 260 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 TXNP10599 105 aaKnown RBP10.83□□□□□ -0.68
VPS26B-207ENST00000532160 PDIA3P30101 505 aaKnown RBP10.83□□□□□ -0.68
VPS26B-207ENST00000532160 CDC27P30260 824 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 SLC35G1Q2M3R5 365 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 NFRKBQ6P4R8 1299 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 FBXL16Q8N461 479 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 DNERQ8NFT8 737 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 CTCFLQ8NI51 663 aaPredicted RBP10.83□□□□□ -0.68
VPS26B-207ENST00000532160 PIBF1Q8WXW3 757 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 VAT1LQ9HCJ6 419 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 COL20A1Q9P218 1284 aa10.83□□□□□ -0.68
VPS26B-207ENST00000532160 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 PALM3A6NDB9 673 aaPredicted RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 KLRF2D3W0D1 207 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 RFXAPO00287 272 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 DHX16O60231 1041 aaKnown RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 PFKMP08237 780 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 IQCF3P0C7M6 154 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ADD1P35611 737 aaKnown RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 METAP2P50579 478 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 CDC37Q16543 378 aaPredicted RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ME3Q16798 604 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 RTN1Q16799 776 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 BRDTQ58F21 947 aaPredicted RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 FANCBQ8NB91 859 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 AFG1LQ8WV93 481 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 CTAGE1Q96RT6 745 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 CERS4Q9HA82 394 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
VPS26B-207ENST00000532160 PNMA2Q9UL42 364 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 MYH7BA7E2Y1 1941 aa10.82□□□□□ -0.68
VPS26B-207ENST00000532160 ST18O60284 1047 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 KPNA6O60684 536 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 MMP3P08254 477 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 CALM1P0DP23 149 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 CALM2P0DP24 149 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 CALM3P0DP25 149 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 PTMSP20962 102 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 RFC2P35250 354 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 EVCP57679 992 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 TFF2Q03403 129 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 ARHGAP1Q07960 439 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 SCRN1Q12765 414 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 LY6KQ17RY6 165 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 KRT40Q6A162 431 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 CCDC62Q6P9F0 684 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 SEPT14Q6ZU15 432 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 SPRED2Q7Z698 418 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 ADGRF4Q8IZF3 695 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 SRBD1Q8N5C6 995 aaKnown RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 RGS22Q8NE09 1264 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 SYTL5Q8TDW5 730 aaPredicted RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 NECAB3Q96P71 396 aaPredicted RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 TAAR1Q96RJ0 339 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 UHRF1Q96T88 793 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms