RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 FAM83BQ5T0W9 1011 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
CHD7-211ENST00000532149 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 PANX2Q96RD6 677 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 NUP58Q9BVL2 599 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
CHD7-211ENST00000532149 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 ADD3Q9UEY8 706 aaKnown RBP13.72□□□□□ -0.21
CHD7-211ENST00000532149 DNM3Q9UQ16 869 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 GNA14O95837 355 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 CCT6AP40227 531 aaKnown RBP13.71□□□□□ -0.21
CHD7-211ENST00000532149 PRCPP42785 496 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 HSD17B4P51659 736 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 PDE4DQ08499 809 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 TBX2Q13207 712 aaPredicted RBP13.71□□□□□ -0.21
CHD7-211ENST00000532149 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
CHD7-211ENST00000532149 TKFCQ3LXA3 575 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 TCP11X2Q5H9J9 407 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 NOL9Q5SY16 702 aaKnown RBP13.71□□□□□ -0.21
CHD7-211ENST00000532149 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 P2RX5Q93086 422 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 RIT2Q99578 217 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 TSG101Q99816 390 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 TMX1Q9H3N1 280 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 PPP1R1BQ9UD71 204 aaPredicted RBP13.71□□□□□ -0.21
CHD7-211ENST00000532149 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
CHD7-211ENST00000532149 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 MAFGO15525 162 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 EDIL3O43854 480 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 ECE1P42892 770 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 DNM2P50570 870 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 JAG1P78504 1218 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 CCDC144BQ3MJ40 725 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 CENPPQ6IPU0 288 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 LDHDQ86WU2 507 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 GPRC5DQ9NZD1 345 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 CTNND2Q9UQB3 1225 aa13.7□□□□□ -0.22
CHD7-211ENST00000532149 LOXHD1Q8IVV2 1947 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 AKR1B15C9JRZ8 316 aaPredicted RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 N4BP3O15049 544 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 CDC25AP30304 524 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 BACE1P56817 501 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 CCZ1BP86790 482 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 CCZ1P86791 482 aaPredicted RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 USH1GQ495M9 461 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 CEP55Q53EZ4 464 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 PRR16Q569H4 304 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 ZNF280CQ8ND82 737 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
CHD7-211ENST00000532149 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
CHD7-211ENST00000532149 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
CHD7-211ENST00000532149 A0A087WWV3 80 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 ATP2A1O14983 1001 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 STAM2O75886 525 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 GAP43P17677 238 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 EHHADHQ08426 723 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
CHD7-211ENST00000532149 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 CSGALNACT2Q8N6G5 542 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 SYT2Q8N9I0 419 aaPredicted RBP13.68□□□□□ -0.22
CHD7-211ENST00000532149 DDX12PQ92771 950 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHD7-211ENST00000532149 SLC5A5Q92911 643 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 TRIM47Q96LD4 638 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 NAP1L5Q96NT1 182 aaPredicted RBP13.68□□□□□ -0.22
CHD7-211ENST00000532149 HOXC10Q9NYD6 342 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 SEL1LQ9UBV2 794 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 CCPG1Q9ULG6 757 aa13.68□□□□□ -0.22
CHD7-211ENST00000532149 DOCK1Q14185 1865 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 MEIS1O00470 390 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 OPLAHO14841 1288 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHD7-211ENST00000532149 CFBP00751 764 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms