RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 ZXDAP98168 799 aa5.33□□□□□ -1.56
ATM-217ENST00000531957 SLC35F1Q5T1Q4 408 aa5.33□□□□□ -1.56
ATM-217ENST00000531957 RIOX2Q8IUF8 465 aa5.33□□□□□ -1.56
ATM-217ENST00000531957 Q8N1Y9 231 aa5.33□□□□□ -1.56
ATM-217ENST00000531957 DDX1Q92499 740 aaKnown RBP5.33□□□□□ -1.56
ATM-217ENST00000531957 CLDND1Q9NY35 253 aa5.33□□□□□ -1.56
ATM-217ENST00000531957 COA3Q9Y2R0 106 aaPredicted RBP5.33□□□□□ -1.56
ATM-217ENST00000531957 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 AGRPO00253 132 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 MATN3O15232 486 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 KLF4O43474 513 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 SARSP49591 514 aaKnown RBP5.32□□□□□ -1.56
ATM-217ENST00000531957 LSAMPQ13449 338 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 CPZQ66K79 652 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 LINC00482Q8N8I6 264 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 CCDC140Q96MF4 163 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 C11orf84Q9BUA3 381 aaPredicted RBP5.32□□□□□ -1.56
ATM-217ENST00000531957 DUSP10Q9Y6W6 482 aa5.32□□□□□ -1.56
ATM-217ENST00000531957 SUV39H1O43463 412 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 AKAP8O43823 692 aaKnown RBP5.31□□□□□ -1.56
ATM-217ENST00000531957 SMARCA5O60264 1052 aaPredicted RBP5.31□□□□□ -1.56
ATM-217ENST00000531957 MSCO60682 206 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 ITGA1P56199 1179 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 TESK1Q15569 626 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 CR1LQ2VPA4 569 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 STEAP3Q658P3 488 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 TTLL7Q6ZT98 887 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 USP53Q70EK8 1073 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 ZNF761Q86XN6 746 aaPredicted RBP5.31□□□□□ -1.56
ATM-217ENST00000531957 FAM126BQ8IXS8 530 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 SLC43A3Q8NBI5 491 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 ARRDC4Q8NCT1 418 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 ADAMTS17Q8TE56 1095 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 KCTD13Q8WZ19 329 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 SAMD11Q96NU1 681 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 GMLQ99445 158 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 EPN3Q9H201 632 aa5.31□□□□□ -1.56
ATM-217ENST00000531957 PPARGC1AQ9UBK2 798 aaKnown RBP5.31□□□□□ -1.56
ATM-217ENST00000531957 H7BY64 318 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 DLX3O60479 287 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 THBS2P35442 1172 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
ATM-217ENST00000531957 KYQ8NBH2 561 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 C1QTNF3Q9BXJ4 246 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 ARHGEF4Q9NR80 690 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 IGSF5Q9NSI5 407 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 NPFFR2Q9Y5X5 522 aa5.3□□□□□ -1.56
ATM-217ENST00000531957 TCRBV5S2A0A599 114 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 BLACEA4D250 179 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 HGSO14964 777 aaPredicted RBP5.29□□□□□ -1.56
ATM-217ENST00000531957 PRODHO43272 600 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 PLATP00750 562 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 MAP4K2Q12851 820 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 YOD1Q5VVQ6 348 aaPredicted RBP5.29□□□□□ -1.56
ATM-217ENST00000531957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATM-217ENST00000531957 LOXL4Q96JB6 756 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATM-217ENST00000531957 AARSD1Q9BTE6 412 aaKnown RBP5.29□□□□□ -1.56
ATM-217ENST00000531957 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
ATM-217ENST00000531957 TADA3O75528 432 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 DGKIO75912 1065 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 ZNF20P17024 532 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
ATM-217ENST00000531957 NKX3-2P78367 333 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 ADAM9Q13443 819 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 RAB33AQ14088 237 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 HSP90AA2PQ14568 343 aaPredicted RBP5.28□□□□□ -1.56
ATM-217ENST00000531957 CHRNA2Q15822 529 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 RGL3Q3MIN7 710 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 BORAQ6PGQ7 559 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 KCNT2Q6UVM3 1135 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 TRIM55Q9BYV6 548 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 EPB41L1Q9H4G0 881 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 MYOTQ9UBF9 498 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 RBPJLQ9UBG7 517 aa5.28□□□□□ -1.56
ATM-217ENST00000531957 DDX3XO00571 662 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATM-217ENST00000531957 SLC27A2O14975 620 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 NTRK3Q16288 839 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 EMC4Q5J8M3 183 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 TEPPQ6URK8 271 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 FAM124AQ86V42 546 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
ATM-217ENST00000531957 LGI4Q8N135 537 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 TTLL6Q8N841 843 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 PIP4K2CQ8TBX8 421 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 TOE1Q96GM8 510 aaKnown RBP5.27□□□□□ -1.57
ATM-217ENST00000531957 C8orf49Q96NF6 230 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 GPR27Q9NS67 375 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 DTLQ9NZJ0 730 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
ATM-217ENST00000531957 CCDC85CA6NKD9 419 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms