RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 ITGA4P13612 1032 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 EPHB4P54760 987 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 ZNF445P59923 1031 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 DPTQ07507 201 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 HNRNPA0Q13151 305 aaKnown RBP5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 DPH6Q7L8W6 267 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 EEPD1Q7L9B9 569 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 ADAT2Q7Z6V5 191 aaKnown RBP5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 MKL1Q969V6 931 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 APBA2Q99767 749 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 CCDC113Q9H0I3 377 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 GBP3Q9H0R5 595 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 WHRNQ9P202 907 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 FHOD1Q9Y613 1164 aa5.79□□□□□ -1.48
AP004247.1-201ENST00000531556 PATE3B3GLJ2 98 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 NPIPB8E9PQR5 432 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 PPM1BO75688 479 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 CCDC144BQ3MJ40 725 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 LZTR1Q8N653 840 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 ZNF513Q8N8E2 541 aaPredicted RBP5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 IGDCC4Q8TDY8 1250 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 BRF1Q92994 677 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 TNFRSF18Q9Y5U5 241 aa5.78□□□□□ -1.48
AP004247.1-201ENST00000531556 CCDC85CA6NKD9 419 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 PDPK1O15530 556 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 C8BP07358 591 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 NANOS3P60323 173 aaKnown RBP5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 PPP2CBP62714 309 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 PPP2CAP67775 309 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 FOXE3Q13461 319 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 RASGRF1Q13972 1273 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 RASA3Q14644 834 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 HS1BP3Q53T59 392 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 SLFN13Q68D06 897 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 LRP10Q7Z4F1 713 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 FIBCD1Q8N539 461 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 ADCY4Q8NFM4 1077 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 RCC1LQ96I51 464 aaKnown RBP5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 DEPDC7Q96QD5 511 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 EPN3Q9H201 632 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 ZSWIM4Q9H7M6 989 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 RXFP1Q9HBX9 757 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 JADE2Q9NQC1 790 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 SNTG2Q9NY99 539 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
AP004247.1-201ENST00000531556 FAM221BA6H8Z2 402 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 DDX3XO00571 662 aaKnown RBP eCLIP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 ZNF623O75123 536 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 BMS1Q14692 1282 aaKnown RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 SLC10A6Q3KNW5 377 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 SV2CQ496J9 727 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 ARHGEF18Q6ZSZ5 1173 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 ARHGEF39Q8N4T4 335 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 ST13P5Q8NFI4 369 aaPredicted RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 SRPK1Q96SB4 655 aaKnown RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 DIS3Q9Y2L1 958 aaKnown RBP5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 SUGT1Q9Y2Z0 365 aa5.76□□□□□ -1.49
AP004247.1-201ENST00000531556 H0Y8X5 98 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 ATXN1P54253 815 aaKnown RBP5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 PPP2R5DQ14738 602 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 NFE2L2Q16236 605 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 MIIPQ5JXC2 388 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 PRR31Q5SQ13 230 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 ETV3LQ6ZN32 361 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 ZC3H18Q86VM9 953 aaKnown RBP5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 BVESQ8NE79 360 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 WWC2-AS2Q96NR7 200 aa5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 CGGBP1Q9UFW8 167 aaPredicted RBP5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 SF3B6Q9Y3B4 125 aaKnown RBP5.75□□□□□ -1.49
AP004247.1-201ENST00000531556 CYP1A1P04798 512 aaPredicted RBP5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 MCM7P33993 719 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 MTERF2Q49AM1 385 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 DNAJC10Q8IXB1 793 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 PPP1R14AQ96A00 147 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 ZNF669Q96BR6 464 aaPredicted RBP5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 NAF1Q96HR8 494 aaKnown RBP5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 ZDHHC15Q96MV8 337 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 LGR4Q9BXB1 951 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 IKZF4Q9H2S9 585 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 PIF1Q9H611 641 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 AKT3Q9Y243 479 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 EMC9Q9Y3B6 208 aa5.74□□□□□ -1.49
AP004247.1-201ENST00000531556 AGRPO00253 132 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 NOP56O00567 594 aaKnown RBP5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 ZNF202O95125 648 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 ITGAVP06756 1048 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 INHBCP55103 352 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 IFRD2Q12894 506 aaPredicted RBP5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 GRB10Q13322 594 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 PKN3Q6P5Z2 889 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 POMZP3Q6PJE2 187 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 SPATC1Q76KD6 591 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 ZNF227Q86WZ6 799 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 MRFAP1L1Q96HT8 127 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 MRGPRX3Q96LB0 322 aa5.73□□□□□ -1.49
AP004247.1-201ENST00000531556 FCRL3Q96P31 734 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms