RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 FOXR1Q6PIV2 292 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 MKL1Q969V6 931 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 MTMR8Q96EF0 704 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 MED4Q9NPJ6 270 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
USP35-207ENST00000530546 DEFB132Q7Z7B7 95 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
USP35-207ENST00000530546 HAS1Q92839 578 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■□□□□ 11.1
USP35-207ENST00000530546 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 TUBBP07437 444 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 USP8P40818 1118 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
USP35-207ENST00000530546 ANKRD40Q6AI12 368 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 PANX2Q96RD6 677 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 A0A0U1RQJ8 604 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 A0A1W2PRG0 241 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 PSMD14O00487 310 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 TUBB2AQ13885 445 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 ECM1Q16610 540 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 TTI2Q6NXR4 508 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 SRGAP1Q7Z6B7 1085 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 P2RX5Q93086 422 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 WDR24Q96S15 920 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 DUSP9Q99956 384 aaKnown RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 TUBB2BQ9BVA1 445 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 MAP2K2P36507 400 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 ECE1P42892 770 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
USP35-207ENST00000530546 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
USP35-207ENST00000530546 B4DLN1 442 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 ENTPD3O75355 529 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 BMP3P12645 472 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 STAT3P40763 770 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 LRRC41Q15345 812 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 CEP112Q8N8E3 955 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 KIAA0895Q8NCT3 520 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 RAD54LQ92698 747 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 DHTKD1Q96HY7 919 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 TACO1Q9BSH4 297 aaKnown RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 DPEP1P16444 411 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 ERCC3P19447 782 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 CCNE1P24864 410 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 KRT9P35527 623 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 CNNM4Q6P4Q7 775 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 FBXO11Q86XK2 927 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 CNGA4Q8IV77 575 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 P2RX7Q99572 595 aaKnown RBP12.82□□□□□ -0.36
USP35-207ENST00000530546 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
USP35-207ENST00000530546 PDIA5Q14554 519 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 PRR16Q569H4 304 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 DDX12PQ92771 950 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
USP35-207ENST00000530546 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 ANKZF1Q9H8Y5 726 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 STK17AQ9UEE5 414 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 CCDC175P0C221 793 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
USP35-207ENST00000530546 MB21D1Q8N884 522 aa12.81□□□□□ -0.36
USP35-207ENST00000530546 GLIS3Q8NEA6 775 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms