RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MYADML2A6NDP7 307 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 SPATA31C2B4DYI2 1134 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 MAFGO15525 162 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 ADCY6O43306 1168 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 LARGE1O95461 756 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 UBA1P22314 1058 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 ICAM3P32942 547 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 KRT2P35908 639 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CLK2P49760 499 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 MNX1P50219 401 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 RTP1P59025 263 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CHMP4BP1P59074 171 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NKX3-2P78367 333 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 MRPS9P82933 396 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 ARHGAP1Q07960 439 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NONOQ15233 471 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 TRIM60Q495X7 471 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CEP55Q53EZ4 464 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 FAM47CQ5HY64 1035 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CELF3Q5SZQ8 465 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 PRPF38BQ5VTL8 546 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CCDC62Q6P9F0 684 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 METTL7BQ6UX53 244 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 CXCL17Q6UXB2 119 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 SLC39A5Q6ZMH5 540 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NIPA1Q7RTP0 329 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 DAGLBQ8NCG7 672 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 PPTC7Q8NI37 304 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 AFG1LQ8WV93 481 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 EMID1Q96A84 441 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 PGBD1Q96JS3 809 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 KIF2CQ99661 725 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NAP1L4Q99733 375 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 LBHD1Q9BQE6 289 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 JADE2Q9NQC1 790 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 TMEM260Q9NX78 707 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 DDX41Q9UJV9 622 aaKnown RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZNF215Q9UL58 517 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 NOD1Q9Y239 953 aa6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P40-201ENST00000525121 MYH6P13533 1939 aa6.15□□□□□ -1.43
HMGB1P40-201ENST00000525121 A6NJR5 290 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 MARCH6O60337 910 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 SORBS3O60504 671 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 JAK2O60674 1132 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PQBP1O60828 265 aaKnown RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PPFIA4O75335 1185 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 ARIH2O95376 493 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 MMP3P08254 477 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 USP11P51784 963 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 FOSBP53539 338 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PURAQ00577 322 aaKnown RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 SP4Q02446 784 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 ITGA7Q13683 1181 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 SNX17Q15036 470 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 LRRC26Q2I0M4 334 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 MYSM1Q5VVJ2 828 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 CCSAPQ6IQ19 270 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 CYFIP1Q7L576 1253 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PLA2G4DQ86XP0 818 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 RASGRP4Q8TDF6 673 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 COPS5Q92905 334 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 TNPO1Q92973 898 aaKnown RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZFP91Q96JP5 570 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 C8orf76Q96K31 380 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 AIFM3Q96NN9 605 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 SENP7Q9BQF6 1050 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 MXRA8Q9BRK3 442 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PHF20Q9BVI0 1012 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 JPH1Q9HDC5 661 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 PKD2L1Q9P0L9 805 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 KCNJ14Q9UNX9 436 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 UBIAD1Q9Y5Z9 338 aa6.14□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZNFX1Q9P2E3 1918 aaKnown RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 H0YGN5 161 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 H3BQV1 296 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ARVCFO00192 962 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 CTAGE5O15320 804 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 RGS20O76081 388 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 CTDNEP1O95476 244 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 MMP1P03956 469 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 CYP3A4P08684 503 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 CLTBP09497 229 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 SUPT20HL2P0C7V6 817 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ZNF286BP0CG31 522 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 GCFC2P16383 781 aaKnown RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ITGB5P18084 799 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 PSMC6P62333 389 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 IRX5P78411 483 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TLE2Q04725 743 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 PTPN11Q06124 597 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 PRR16Q569H4 304 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 TMEM63BQ5T3F8 832 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 NFRKBQ6P4R8 1299 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 ANKRD33Q7Z3H0 272 aa6.13□□□□□ -1.43
HMGB1P40-201ENST00000525121 NEK8Q86SG6 692 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms