RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 CLCN6P51797 869 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 ZNF662Q6ZS27 426 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 CSGALNACT2Q8N6G5 542 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 CDK5RAP3Q96JB5 506 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 DNAJC7Q99615 494 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 VAT1LQ9HCJ6 419 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 SERPINB13Q9UIV8 391 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 ABCB11O95342 1321 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 TUBBP07437 444 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 GCFC2P16383 781 aaKnown RBP25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 CACNB3P54284 484 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 SEPT2Q15019 361 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 FIGNQ5HY92 759 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 PPP4R3AQ6IN85 833 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 CSRNP1Q96S65 589 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 RIC8AQ9NPQ8 531 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 LZTFL1Q9NQ48 299 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 ZNHIT6Q9NWK9 470 aaKnown RBP25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 LRWD1Q9UFC0 647 aa25.07■■□□□ 1.6
NKX6-3-202ENST00000524115 TNNI2P48788 182 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 MRPL12P52815 198 aaKnown RBP25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 KRT83P78385 493 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 PSMD2Q13200 908 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 SRGAP1Q7Z6B7 1085 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 TEPSINQ96N21 525 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 EHD4Q9H223 541 aa25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 BIN2Q9UBW5 565 aaPredicted RBP25.06■■□□□ 1.6
NKX6-3-202ENST00000524115 SSC5DA1L4H1 1573 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 PRKCSHP14314 528 aaPredicted RBP25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 TECP42680 631 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 ZNF543Q08ER8 600 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 MCTP2Q6DN12 878 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 UNC13DQ70J99 1090 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 EHBP1Q8NDI1 1231 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 TMEM39BQ9GZU3 492 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 HAUS4Q9H6D7 363 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 MAPK8IP1Q9UQF2 711 aa25.05■■□□□ 1.6
NKX6-3-202ENST00000524115 ERVK-24P63145 666 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 WHAMMP3Q1A5X7 153 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 ZNF569Q5MCW4 686 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 CDAN1Q8IWY9 1227 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 LRRN4CLQ8ND94 238 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 NAPGQ99747 312 aaPredicted RBP25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 TUBGCP2Q9BSJ2 902 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 ZMYND15Q9H091 742 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 USP40Q9NVE5 1235 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 EPN1Q9Y6I3 576 aaPredicted RBP25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 A0A1W2PQJ5 194 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 FKBP15Q5T1M5 1219 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 KRT79Q5XKE5 535 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 DUSP9Q99956 384 aaKnown RBP25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 UBA5Q9GZZ9 404 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 TMOD2Q9NZR1 351 aa25.04■■□□□ 1.6
NKX6-3-202ENST00000524115 TRIM49BA6NDI0 452 aa25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 USP2O75604 605 aaPredicted RBP25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 ZRANB2O95218 330 aaKnown RBP eCLIP25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 CYLC1P35663 651 aaPredicted RBP25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 FKBP1CQ5VVH2 108 aa25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 REM2Q8IYK8 340 aaPredicted RBP25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 CCDC170Q8IYT3 715 aa25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 CUL5Q93034 780 aa25.03■■□□□ 1.6
NKX6-3-202ENST00000524115 NDUFA10O95299 355 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 AKR1B1P15121 316 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 TXKP42681 527 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 ZBED6P86452 979 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 CDK17Q00537 523 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 PICALMQ13492 652 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 BRD3Q15059 726 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 ZSCAN29Q8IWY8 852 aaPredicted RBP25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 SLC10A4Q96EP9 437 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 PLIN2Q99541 437 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 MMTAG2Q9BU76 263 aaKnown RBP25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 CPVLQ9H3G5 476 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 ZNF446Q9NWS9 450 aa25.02■■□□□ 1.6
NKX6-3-202ENST00000524115 TTC26A0AVF1 554 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 IPO7O95373 1038 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 MTIF2P46199 727 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 CHMP4BP1P59074 171 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 TBC1D8BQ0IIM8 1120 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 MKRN3Q13064 507 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 MEA1Q16626 185 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 CENPPQ6IPU0 288 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 FAM83AQ86UY5 434 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 POTEDQ86YR6 584 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 GUF1Q8N442 669 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 LARP4BQ92615 738 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 ERGIC2Q96RQ1 377 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 DHX36Q9H2U1 1008 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 RNF186Q9NXI6 227 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 FRMPD2Q68DX3 1309 aaPredicted RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 UNCXA6NJT0 531 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 COBLO75128 1261 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 IREB2P48200 963 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 PMS1P54277 932 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 LRRC63Q05C16 580 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 TEX35Q5T0J7 233 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 CDC42EP5Q6NZY7 148 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 CLMNQ96JQ2 1002 aa25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 CNOT6LQ96LI5 555 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-202ENST00000524115 KDM3AQ9Y4C1 1321 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms