RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RAD52P43351 418 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 GPR3P46089 330 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 FXR1P51114 621 aaKnown RBP eCLIP4.76□□□□□ -1.65
SKP1-209ENST00000522552 CCDC38Q502W7 563 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 BROXQ5VW32 411 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 PDZD4Q76G19 769 aaPredicted RBP4.76□□□□□ -1.65
SKP1-209ENST00000522552 ARMCX6Q7L4S7 300 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 GALNT5Q7Z7M9 940 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 NPAS3Q8IXF0 933 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 PHACTR4Q8IZ21 702 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 TMEM145Q8NBT3 493 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 NUP133Q8WUM0 1156 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 RPGRQ92834 1020 aaKnown RBP4.76□□□□□ -1.65
SKP1-209ENST00000522552 SMARCC1Q92922 1105 aaPredicted RBP4.76□□□□□ -1.65
SKP1-209ENST00000522552 BRF1Q92994 677 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 DDX11Q96FC9 970 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 C1orf159Q96HA4 380 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 TMEM60Q9H2L4 133 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 UNC45AQ9H3U1 944 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 PRKRIP1Q9H875 184 aaPredicted RBP4.76□□□□□ -1.65
SKP1-209ENST00000522552 PRDM6Q9NQX0 595 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 AKT3Q9Y243 479 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 COQ6Q9Y2Z9 468 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 TTLL3Q9Y4R7 772 aa4.76□□□□□ -1.65
SKP1-209ENST00000522552 A0A087WV62 115 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 LOC102724428A0A0B4J2F2 783 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 RGS13O14921 159 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 EFSO43281 561 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 APPP05067 770 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 POU2F2P09086 479 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 GLULP15104 373 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 TNFSF4P23510 183 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 PEX2P28328 305 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 SMARCA1P28370 1054 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 TSPAN7P41732 249 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 PIK3CBP42338 1070 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 SIK1P57059 783 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 AP3B2Q13367 1082 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 PRSS53Q2L4Q9 553 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 SPATA1Q5VX52 437 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 MSL1Q68DK7 614 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 DARS2Q6PI48 645 aaKnown RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 POMZP3Q6PJE2 187 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 KCNT2Q6UVM3 1135 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 USP53Q70EK8 1073 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 CYFIP1Q7L576 1253 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 FASTKD5Q7L8L6 764 aaKnown RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 DPP9Q86TI2 863 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 CCDC144CPQ8IYA2 1237 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 KRT78Q8N1N4 520 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 GPR161Q8N6U8 529 aaKnown RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 FAM13CQ8NE31 585 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 JADE3Q92613 823 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 HDAC2Q92769 488 aaKnown RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 ELMO3Q96BJ8 720 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 TMEM169Q96HH4 297 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 MAP3K14Q99558 947 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 TOPORSQ9NS56 1045 aaPredicted RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 WHRNQ9P202 907 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 ISY1Q9ULR0 285 aaKnown RBP4.75□□□□□ -1.65
SKP1-209ENST00000522552 ZNF451Q9Y4E5 1061 aa4.75□□□□□ -1.65
SKP1-209ENST00000522552 PRAMEF27A3QJZ7 478 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 GPR25O00155 361 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 GOLIM4O00461 696 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 AREL1O15033 823 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 KCNH1O95259 989 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 HSP90AB1P08238 724 aaKnown RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 PTPRAP18433 802 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 KCNJ6P48051 423 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 MECP2P51608 486 aaKnown RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 MLLT1Q03111 559 aaPredicted RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 ANO4Q32M45 955 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 TBC1D10BQ4KMP7 808 aaPredicted RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 SLC35F1Q5T1Q4 408 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 CEP135Q66GS9 1140 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 CREB3L3Q68CJ9 461 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 GTF2IRD2BQ6EKJ0 949 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 HFE2Q6ZVN8 426 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 MTDHQ86UE4 582 aaKnown RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 GTF2IRD2Q86UP8 949 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 KIAA0319LQ8IZA0 1049 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 MIER2Q8N344 545 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 ADCY4Q8NFM4 1077 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 LMBR1Q8WVP7 490 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 RCC1LQ96I51 464 aaKnown RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 PPP1R16BQ96T49 567 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 B3GNT5Q9BYG0 378 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 DMRT3Q9NQL9 472 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 CCM2LQ9NUG4 571 aaPredicted RBP4.74□□□□□ -1.65
SKP1-209ENST00000522552 L1RE1Q9UN81 338 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 DYRK1BQ9Y463 629 aa4.74□□□□□ -1.65
SKP1-209ENST00000522552 SPDYE3A6NKU9 549 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DCDC2CA8MYV0 355 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms