RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 EMSYQ7Z589 1322 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 C5orf67F2Z3F1 127 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 GLP2RO95838 553 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 GH1P01241 217 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 DNAJB1P25685 340 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 SLC16A2P36021 539 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 KREMEN2Q8NCW0 462 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 SMOC2Q9H3U7 446 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 PAG1Q9NWQ8 432 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 RALYQ9UKM9 306 aaKnown RBP13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 NCOR2Q9Y618 2525 aa13.1□□□□□ -0.31
CTNNA1-234ENST00000522227 MMP1P03956 469 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 ICAM1P05362 532 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 ARHGAP1Q07960 439 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 COASYQ13057 564 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 CAMK1Q14012 370 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 DGKDQ16760 1214 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 MPHOSPH6Q99547 160 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
CTNNA1-234ENST00000522227 PER2O15055 1255 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 PUM1Q14671 1186 aaKnown RBP eCLIP13.08□□□□□ -0.329e-7■□□□□ 9.3
CTNNA1-234ENST00000522227 SBK1Q52WX2 424 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 PLAGL2Q9UPG8 496 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 ADGRA3Q8IWK6 1321 aa13.08□□□□□ -0.32
CTNNA1-234ENST00000522227 VPS13AQ96RL7 3174 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 ANP32CO43423 234 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 PPFIA3O75145 1194 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 BRD1O95696 1058 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 ARP10275 920 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 RPS6P62753 249 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 KMT2BQ9UMN6 2715 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-234ENST00000522227 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 GSG1L2A8MUP6 293 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 ITGB1P05556 798 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 EDNRBP24530 442 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 TDO2P48775 406 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 TFAP4Q01664 338 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 ST3GAL2Q16842 350 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 ATP6V0A1Q93050 837 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 TLE6Q9H808 572 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
CTNNA1-234ENST00000522227 APPP05067 770 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 SERINC5Q86VE9 423 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 SPPL3Q8TCT6 385 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 POF1BQ8WVV4 589 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 SYNPO2Q9UMS6 1093 aa13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
CTNNA1-234ENST00000522227 EP300Q09472 2414 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 B4DLN1 442 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 HAS3O00219 553 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 TREHO43280 583 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 NMT2O60551 498 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 PLA2G6O60733 806 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 F2P00734 622 aa13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-234ENST00000522227 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms