RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 TRIM28Q13263 835 aaKnown RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 NMIQ13287 307 aaPredicted RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 RASA3Q14644 834 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 NECTIN1Q15223 517 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 EPHA10Q5JZY3 1008 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 STRIP1Q5VSL9 837 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 CREB3L3Q68CJ9 461 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 BLOC1S2Q6QNY1 142 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 LMBR1LQ6UX01 489 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 RUFY3Q7L099 469 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 ZGPATQ8N5A5 531 aaKnown RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 GLIS3Q8NEA6 775 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.64□□□□□ -1.67
PVT1-211ENST00000521600 MAP4K1Q92918 833 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 SPACA7Q96KW9 195 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 JAKMIP1Q96N16 626 aaKnown RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 TEPSINQ96N21 525 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 TTC14Q96N46 770 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 CNTNAP3BQ96NU0 1288 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 NECAB3Q96P71 396 aaPredicted RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 OSMRQ99650 979 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 ZKSCAN3Q9BRR0 538 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 CNTNAP3Q9BZ76 1288 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 UPF3BQ9BZI7 483 aaKnown RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 CCDC8Q9H0W5 538 aaPredicted RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 BOLA2Q9H3K6 86 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 SMC3Q9UQE7 1217 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 AKAP2Q9Y2D5 859 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 PPP2R3BQ9Y5P8 575 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 RBM8AQ9Y5S9 174 aaKnown RBP4.64□□□□□ -1.67
PVT1-211ENST00000521600 SNCAIPQ9Y6H5 919 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 XDHP47989 1333 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 FAM205AQ6ZU69 1335 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 MYO3BQ8WXR4 1341 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 MYO15AQ9UKN7 3530 aa4.64□□□□□ -1.67
PVT1-211ENST00000521600 ZDBF2Q9HCK1 2354 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 EYA2O00167 538 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 IRS4O14654 1257 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 LETM1O95202 739 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 GHRHP01286 108 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 PCCAP05165 728 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 BCRP11274 1271 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 XRCC6P12956 609 aaKnown RBP eCLIP4.63□□□□□ -1.67
PVT1-211ENST00000521600 HOXD8P13378 290 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 HSP90B1P14625 803 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 FLT3LGP49771 235 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 PCBP4P57723 403 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 GPLD1P80108 840 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 FOXO4P98177 505 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 PTH1RQ03431 593 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 MOGSQ13724 837 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 CCDC57Q2TAC2 916 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 SUPT20HL1Q3ZLR7 823 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 ZNF468Q5VIY5 522 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 METTL16Q86W50 562 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 NT5DC4Q86YG4 428 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 CEP120Q8N960 986 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.63□□□□□ -1.67
PVT1-211ENST00000521600 PRMT6Q96LA8 375 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 HHIPQ96QV1 700 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 HAUS7Q99871 368 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 LRFN3Q9BTN0 628 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 ISCA1Q9BUE6 129 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 PLA2G12BQ9BX93 195 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.63□□□□□ -1.673e-6■■□□□ 13.5
PVT1-211ENST00000521600 IL25Q9H293 177 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 C11orf49Q9H6J7 331 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 LIN7BQ9HAP6 207 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 VEZTQ9HBM0 779 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 METTL5Q9NRN9 209 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 HELLSQ9NRZ9 838 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 LMBRD1Q9NUN5 540 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 DNAJB12Q9NXW2 375 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 NXF1Q9UBU9 619 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 DBNLQ9UJU6 430 aaKnown RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 SPTBN4Q9H254 2564 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 ZNF318Q5VUA4 2279 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 BRWD1Q9NSI6 2320 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 RPAP1Q9BWH6 1393 aaPredicted RBP4.63□□□□□ -1.67
PVT1-211ENST00000521600 LRRC37A2A6NM11 1700 aa4.63□□□□□ -1.67
PVT1-211ENST00000521600 DMDP11532 3685 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 A0A0D9SFI3 127 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 METTL12A8MUP2 240 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 F8W031 263 aaPredicted RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 PDHXO00330 501 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 SLC27A2O14975 620 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 STX6O43752 255 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 WDHD1O75717 1129 aaPredicted RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 ZFYP08048 801 aaPredicted RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 ZSCAN22P10073 491 aaPredicted RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 CETPP11597 493 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 EIF2AK2P19525 551 aaKnown RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 HOXD10P28358 340 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 GSTT1P30711 240 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 ATP11AP98196 1134 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 RAD51AP2Q09MP3 1159 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 CCDC173Q0VFZ6 552 aa4.62□□□□□ -1.67
PVT1-211ENST00000521600 IFIT5Q13325 482 aaKnown RBP4.62□□□□□ -1.67
PVT1-211ENST00000521600 PKP1Q13835 747 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms