RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 B4E1Z4 1266 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 EIF3JO75822 258 aaKnown RBP20.97■□□□□ 0.95
TFF3-204ENST00000518498 PARP1P09874 1014 aaKnown RBP20.97■□□□□ 0.95
TFF3-204ENST00000518498 KCNJ6P48051 423 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 BECN1Q14457 450 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 DGKDQ16760 1214 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 QRICH1Q2TAL8 776 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 KAT2BQ92831 832 aa20.97■□□□□ 0.95
TFF3-204ENST00000518498 DDX41Q9UJV9 622 aaKnown RBP20.97■□□□□ 0.95
TFF3-204ENST00000518498 EPOPA6NHQ4 379 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 TLL1O43897 1013 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 PARNO95453 639 aaKnown RBP20.96■□□□□ 0.95
TFF3-204ENST00000518498 SELPP16109 830 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 FGD1P98174 961 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 EXOSC10Q01780 885 aaKnown RBP20.96■□□□□ 0.95
TFF3-204ENST00000518498 FBXL16Q8N461 479 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 C7orf31Q8N865 590 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 ENAHQ8N8S7 591 aaPredicted RBP20.96■□□□□ 0.95
TFF3-204ENST00000518498 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 JMJD4Q9H9V9 463 aa20.96■□□□□ 0.95
TFF3-204ENST00000518498 ERICH2A1L162 156 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 PRC1O43663 620 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 CFBP00751 764 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 NR3C2P08235 984 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 EIF2AK2P19525 551 aaKnown RBP20.95■□□□□ 0.94
TFF3-204ENST00000518498 LAMC2Q13753 1193 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 GPNMBQ14956 572 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 LRRC8DQ7L1W4 858 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 HSCBQ8IWL3 235 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 CTAGE1Q96RT6 745 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 ZBED2Q9BTP6 218 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 HDAC6Q9UBN7 1215 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 GTF2IRD1Q9UHL9 959 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 COG5Q9UP83 839 aa20.95■□□□□ 0.94
TFF3-204ENST00000518498 ARHGEF15O94989 841 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 PSEN2P49810 448 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 KCNQ1P51787 676 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 WDR5P61964 334 aaKnown RBP20.94■□□□□ 0.94
TFF3-204ENST00000518498 KRT40Q6A162 431 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 CNKSR3Q6P9H4 555 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 DHX37Q8IY37 1157 aaKnown RBP20.94■□□□□ 0.94
TFF3-204ENST00000518498 EMID1Q96A84 441 aaPredicted RBP20.94■□□□□ 0.94
TFF3-204ENST00000518498 NECAB3Q96P71 396 aaPredicted RBP20.94■□□□□ 0.94
TFF3-204ENST00000518498 UBAC1Q9BSL1 405 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 ALG1Q9BT22 464 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 KATNAL1Q9BW62 490 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 AMNQ9BXJ7 453 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 PXMP2Q9NR77 195 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 MRVI1Q9Y6F6 885 aa20.94■□□□□ 0.94
TFF3-204ENST00000518498 CKBP12277 381 aa20.93■□□□□ 0.94
TFF3-204ENST00000518498 CPA1P15085 419 aa20.93■□□□□ 0.94
TFF3-204ENST00000518498 TMTC2Q8N394 836 aa20.93■□□□□ 0.94
TFF3-204ENST00000518498 DHX38Q92620 1227 aaKnown RBP20.93■□□□□ 0.94
TFF3-204ENST00000518498 CHD7Q9P2D1 2997 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 CXCL10P02778 98 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 RBL2Q08999 1139 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 GRB10Q13322 594 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 MFSD10Q14728 455 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 CYB5R4Q7L1T6 521 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 PPTC7Q8NI37 304 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
TFF3-204ENST00000518498 TANC1Q9C0D5 1861 aa20.92■□□□□ 0.94
TFF3-204ENST00000518498 ABHD14A-ACY1A0A1B0GW23 586 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
TFF3-204ENST00000518498 NBNO60934 754 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 PPFIA4O75335 1185 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 MYCLP12524 364 aaPredicted RBP20.91■□□□□ 0.94
TFF3-204ENST00000518498 HSD17B4P51659 736 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 AK2P54819 239 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 ANTXR2P58335 489 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 PTK7Q13308 1070 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 KIAA0753Q2KHM9 967 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 IFIT1BQ5T764 474 aaKnown RBP20.91■□□□□ 0.94
TFF3-204ENST00000518498 KCNV1Q6PIU1 500 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 Q6ZUG5 572 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 TMCO2Q7Z6W1 182 aaPredicted RBP20.91■□□□□ 0.94
TFF3-204ENST00000518498 STAG2Q8N3U4 1231 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 HLA-CQ95604 372 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 TTC28Q96AY4 2481 aa20.91■□□□□ 0.94
TFF3-204ENST00000518498 ZSCAN31Q96LW9 406 aaPredicted RBP20.91■□□□□ 0.94
TFF3-204ENST00000518498 TRIP12Q14669 1992 aaPredicted RBP20.9■□□□□ 0.94
TFF3-204ENST00000518498 KLRF2D3W0D1 207 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 HAS3O00219 553 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 LIFRP42702 1097 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 DEFB103AP81534 67 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 IKBKEQ14164 716 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 SAMD3Q8N6K7 520 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 RAD9AQ99638 391 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 LMCD1Q9NZU5 365 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 LIMCH1Q9UPQ0 1083 aa20.9■□□□□ 0.94
TFF3-204ENST00000518498 TCF20Q9UGU0 1960 aaKnown RBP20.89■□□□□ 0.93
TFF3-204ENST00000518498 KIAA1217Q5T5P2 1943 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 LCHNA4D1U4 455 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 OPLAHO14841 1288 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 LPXNO60711 386 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 EFCAB14O75071 495 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 F2P00734 622 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 ZNF286BP0CG31 522 aa20.89■□□□□ 0.93
TFF3-204ENST00000518498 GHRHRQ02643 423 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms