RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 STYK1Q6J9G0 422 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 SPOCD1Q6ZMY3 1216 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 LYSMD3Q7Z3D4 306 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 RAB44Q7Z6P3 723 aaPredicted RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 GALNT5Q7Z7M9 940 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 CRACR2BQ8N4Y2 399 aaPredicted RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 TGFBRAP1Q8WUH2 860 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATRIPQ8WXE1 791 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 DDX11Q96FC9 970 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 RCC1LQ96I51 464 aaKnown RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZSCAN31Q96LW9 406 aaPredicted RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 PPP1R16BQ96T49 567 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 TMEM60Q9H2L4 133 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 CRISPLD1Q9H336 500 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 VPS45Q9NRW7 570 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 HELLSQ9NRZ9 838 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 TOPORSQ9NS56 1045 aaPredicted RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ANKEF1Q9NU02 776 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 OXSMQ9NWU1 459 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 WHRNQ9P202 907 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARHGAP28Q9P2N2 729 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 SOX13Q9UN79 622 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 CEP131Q9UPN4 1083 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 PCDHA11Q9Y5I1 949 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPY2A6NKD2 308 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM227AF5H4B4 570 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TOR1BO14657 336 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 AREL1O15033 823 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATXN7O15265 892 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TGM5O43548 720 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PLOD3O60568 738 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 UBXN7O94888 489 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM200BP0CF97 657 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 DHRS4L1P0CG22 281 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPY3P0CV98 308 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPY8P0CW00 308 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 GLULP15104 373 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PTPRAP18433 802 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PDCP20941 246 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ITGA6P23229 1130 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 GRK2P25098 689 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 HOXD12P35452 270 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 KRT9P35527 623 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 GGCXP38435 758 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TECP42680 631 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSPY1Q01534 308 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ALDH6A1Q02252 535 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 SPEM2Q0P670 501 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 KIF22Q14807 665 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TBC1D10BQ4KMP7 808 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TMEM177Q53S58 311 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZNF697Q5TEC3 545 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCDC30Q5VVM6 783 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 LMBRD2Q68DH5 695 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PGBD2Q6P3X8 592 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TXNDC11Q6PKC3 985 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TMCO3Q6UWJ1 677 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 NPNTQ6UXI9 565 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TTLL7Q6ZT98 887 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 FASTKD5Q7L8L6 764 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 DENND1CQ8IV53 801 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 MCATQ8IVS2 390 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 MICALL1Q8N3F8 863 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARHGEF39Q8N4T4 335 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 CHST14Q8NCH0 376 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZSCAN18Q8TBC5 510 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 BAHD1Q8TBE0 780 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 LMBR1Q8WVP7 490 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 GOLGA1Q92805 767 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 USP13Q92995 863 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 FERMT2Q96AC1 680 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ARL8AQ96BM9 186 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 HVCN1Q96D96 273 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 C1GALT1C1Q96EU7 318 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 MVB12AQ96EY5 273 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 LTV1Q96GA3 475 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCDC74BQ96LY2 380 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 TSEN34Q9BSV6 310 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 B3GNT5Q9BYG0 378 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 LACRTQ9GZZ8 138 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 MKRN2Q9H000 416 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCDC86Q9H6F5 360 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PRDM6Q9NQX0 595 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 SH2B1Q9NRF2 756 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCDC39Q9UFE4 941 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 GJD2Q9UKL4 321 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 L1RE1Q9UN81 338 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAGED2Q9UNF1 606 aaPredicted RBP4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 PCDHGB2Q9Y5G2 931 aa4.63□□□□□ -1.67
RNU4-60P-201ENST00000517239 DCDC2BA2VCK2 349 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM177BA6PVY3 158 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 H3BML4 177 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SOX1O00570 391 aaPredicted RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 SPINT1O43278 529 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 MGEA5O60502 916 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 INMTO95050 263 aa4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CSTBP04080 98 aaKnown RBP4.62□□□□□ -1.67
RNU4-60P-201ENST00000517239 CKMP06732 381 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms