RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 SOX1O00570 391 aaPredicted RBP27.69■■■□□ 2.02
SRPK1-210ENST00000508473 TIMP1P01033 207 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 TGFB3P10600 412 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 SCG2P13521 617 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 SEMA3FQ13275 785 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 MYSM1Q5VVJ2 828 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 ZNF713Q8N859 430 aaPredicted RBP27.69■■■□□ 2.02
SRPK1-210ENST00000508473 PPTC7Q8NI37 304 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 PGBD1Q96JS3 809 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 SPATA33Q96N06 139 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 SEZ6LQ9BYH1 1024 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 BCAS3Q9H6U6 928 aa27.69■■■□□ 2.02
SRPK1-210ENST00000508473 TRMT13Q9NUP7 481 aaKnown RBP27.69■■■□□ 2.02
SRPK1-210ENST00000508473 SPATA31C2B4DYI2 1134 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 PRPF3O43395 683 aaKnown RBP27.68■■■□□ 2.02
SRPK1-210ENST00000508473 SEC24BO95487 1268 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 ICAM3P32942 547 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 NTRK3Q16288 839 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 DGKDQ16760 1214 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 XRRA1Q6P2D8 792 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 SLC26A6Q9BXS9 759 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 MLXIPQ9HAP2 919 aa27.68■■■□□ 2.02
SRPK1-210ENST00000508473 FIBPO43427 364 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 EPHB4P54760 987 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 AKAP17AQ02040 695 aaKnown RBP27.67■■■□□ 2.02
SRPK1-210ENST00000508473 STK3Q13188 491 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 PKN1Q16512 942 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 HSDL1Q3SXM5 330 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 KAT2BQ92831 832 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 TMEM260Q9NX78 707 aa27.67■■■□□ 2.02
SRPK1-210ENST00000508473 ZNF286BP0CG31 522 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 FPGSQ05932 587 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 SHHQ15465 462 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 C9orf50Q5SZB4 431 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 NLRX1Q86UT6 975 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 LRCH3Q96II8 777 aa27.66■■■□□ 2.02
SRPK1-210ENST00000508473 IFNAR1P17181 557 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 CYP2C18P33260 490 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 ANAPC15P60006 121 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 NFRKBQ6P4R8 1299 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 ZNF274Q96GC6 653 aaPredicted RBP27.65■■■□□ 2.02
SRPK1-210ENST00000508473 HIPK3Q9H422 1215 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 EHMT1Q9H9B1 1298 aa27.65■■■□□ 2.02
SRPK1-210ENST00000508473 CYP2C9P11712 490 aa27.64■■■□□ 2.02
SRPK1-210ENST00000508473 NEDD9Q14511 834 aa27.64■■■□□ 2.02
SRPK1-210ENST00000508473 MFSD5Q6N075 450 aa27.64■■■□□ 2.02
SRPK1-210ENST00000508473 CYFIP1Q7L576 1253 aa27.64■■■□□ 2.02
SRPK1-210ENST00000508473 ALG1Q9BT22 464 aa27.64■■■□□ 2.02
SRPK1-210ENST00000508473 RNF26Q9BY78 433 aaPredicted RBP27.64■■■□□ 2.02
SRPK1-210ENST00000508473 SCN10AQ9Y5Y9 1956 aa27.64■■■□□ 2.01
SRPK1-210ENST00000508473 UMODL1Q5DID0 1318 aa27.64■■■□□ 2.01
SRPK1-210ENST00000508473 ITGB5P18084 799 aa27.63■■■□□ 2.01
SRPK1-210ENST00000508473 JAKMIP3Q5VZ66 844 aa27.63■■■□□ 2.01
SRPK1-210ENST00000508473 NOC4LQ9BVI4 516 aaKnown RBP27.63■■■□□ 2.01
SRPK1-210ENST00000508473 ANO3Q9BYT9 981 aa27.63■■■□□ 2.01
SRPK1-210ENST00000508473 UBIAD1Q9Y5Z9 338 aa27.63■■■□□ 2.01
SRPK1-210ENST00000508473 CPLX1O14810 134 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 ADAMTS3O15072 1205 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 EIF5BO60841 1220 aaKnown RBP27.62■■■□□ 2.01
SRPK1-210ENST00000508473 PPFIA4O75335 1185 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 FOSP01100 380 aaPredicted RBP27.62■■■□□ 2.01
SRPK1-210ENST00000508473 SUPT20HL2P0C7V6 817 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 PSEN2P49810 448 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 SP4Q02446 784 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 LRIT3Q3SXY7 679 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 METTL7BQ6UX53 244 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 GPRASP2Q96D09 838 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 GLT8D2Q9H1C3 349 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 PKD2L1Q9P0L9 805 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 TELO2Q9Y4R8 837 aa27.62■■■□□ 2.01
SRPK1-210ENST00000508473 MYH7BA7E2Y1 1941 aa27.61■■■□□ 2.01
SRPK1-210ENST00000508473 NOP56O00567 594 aaKnown RBP27.61■■■□□ 2.01
SRPK1-210ENST00000508473 HOXD8P13378 290 aaPredicted RBP27.61■■■□□ 2.01
SRPK1-210ENST00000508473 CSF2RAP15509 400 aa27.61■■■□□ 2.01
SRPK1-210ENST00000508473 CCL23P55773 120 aa27.61■■■□□ 2.01
SRPK1-210ENST00000508473 PTPN11Q06124 597 aaPredicted RBP27.61■■■□□ 2.01
SRPK1-210ENST00000508473 MFSD10Q14728 455 aa27.61■■■□□ 2.01
SRPK1-210ENST00000508473 TMEM199Q8N511 208 aa27.61■■■□□ 2.01
SRPK1-210ENST00000508473 ATP9AO75110 1047 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 F2P00734 622 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 CLK2P49760 499 aaKnown RBP27.6■■■□□ 2.01
SRPK1-210ENST00000508473 SSRP1Q08945 709 aaKnown RBP27.6■■■□□ 2.01
SRPK1-210ENST00000508473 AP3B2Q13367 1082 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 MTMR1Q13613 665 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 KIAA0753Q2KHM9 967 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 CCDC12Q8WUD4 166 aaPredicted RBP27.6■■■□□ 2.01
SRPK1-210ENST00000508473 KATNAL1Q9BW62 490 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 ZMYND12Q9H0C1 365 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 C6orf50Q9HD87 102 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 JADE2Q9NQC1 790 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 VPS54Q9P1Q0 977 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 TPCN1Q9ULQ1 816 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 NOD1Q9Y239 953 aa27.6■■■□□ 2.01
SRPK1-210ENST00000508473 ESYT2A0FGR8 921 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 PPIGQ13427 754 aaKnown RBP eCLIP27.59■■■□□ 2.017e-10■□□□□ 8.5
SRPK1-210ENST00000508473 GDF6Q6KF10 455 aaPredicted RBP27.59■■■□□ 2.01
SRPK1-210ENST00000508473 TEX2Q8IWB9 1127 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 TRIM22Q8IYM9 498 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 C7orf31Q8N865 590 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 CYP2W1Q8TAV3 490 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms