RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 MAP2K2P36507 400 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 USP17L2Q6R6M4 530 aa17.62■□□□□ 0.41
HMGXB3-202ENST00000503427 CPDO75976 1380 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 SOWAHDA6NJG2 315 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CCNE1P24864 410 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 KCTD2Q14681 263 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 RILPQ96NA2 401 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 PARD6BQ9BYG5 372 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 STK38LQ9Y2H1 464 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 ATF2P15336 505 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 SARNPP82979 210 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 FOXO4P98177 505 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 TMEM179Q6ZVK1 233 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CDHR1Q96JP9 859 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CPSF2Q9P2I0 782 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 JCADQ9P266 1359 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 SLC16A2P36021 539 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CCT5P48643 541 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 ADAT2Q7Z6V5 191 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 ACRBPQ8NEB7 543 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 ZNF577Q9BSK1 485 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 PIK3C2BO00750 1634 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
HMGXB3-202ENST00000503427 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 HIP1RO75146 1068 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 HEXIM1O94992 359 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 AFPP02771 609 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 MAN1A1P33908 653 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 VPS41P49754 854 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 CLCN6P51797 869 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 ARL6IP4Q66PJ3 421 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 METTL13Q8N6R0 699 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 PCDHB6Q9Y5E3 794 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 GIPC1O14908 333 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 SLC8A1P32418 973 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 ODR4Q5SWX8 454 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 PAGE5Q96GU1 130 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 GJD4Q96KN9 370 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 ADD3Q9UEY8 706 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 MYL7Q01449 175 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 NDUFA10O95299 355 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 POLGP54098 1239 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 BPIFB4P59827 614 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 PPP2R5AQ15172 486 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 KCTD16Q68DU8 428 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 EXOC4Q96A65 974 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
HMGXB3-202ENST00000503427 TMOD1P28289 359 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 PRDX5P30044 214 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 PSMC2P35998 433 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 EPB41L5Q9HCM4 733 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 STAM2O75886 525 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 NSFP46459 744 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 FAN1Q9Y2M0 1017 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 MFAP3P55082 362 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 PPP2R5DQ14738 602 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 SEPT2Q15019 361 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 CLEC17AQ6ZS10 378 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 SH3RF3Q8TEJ3 882 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 CCDC127Q96BQ5 260 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 COA7Q96BR5 231 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 MIS12Q9H081 205 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 FAM170AA1A519 330 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 PGRMC1O00264 195 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 POLR2BP30876 1174 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 HINFPQ9BQA5 517 aa17.59■□□□□ 0.41
HMGXB3-202ENST00000503427 ATP1A3P13637 1013 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 PSMD2Q13200 908 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 HAUS1Q96CS2 278 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 NACC1Q96RE7 527 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 TNNC2P02585 160 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 RESP18Q5W5W9 173 aa17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 MAGOHBQ96A72 148 aaKnown RBP17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 NHEJ1Q9H9Q4 299 aaPredicted RBP17.58■□□□□ 0.41
HMGXB3-202ENST00000503427 DLATP10515 647 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 LMNB2Q03252 620 aa17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 SEPT6Q14141 434 aa17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 C10orf76Q5T2E6 689 aa17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 TBC1D10CQ8IV04 446 aa17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 DAAM1Q9Y4D1 1078 aa17.58■□□□□ 0.4
HMGXB3-202ENST00000503427 PTK2Q05397 1052 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms