RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CLDND1Q9NY35 253 aa18.33■□□□□ 0.52
HDAC6-236ENST00000498808 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.52
HDAC6-236ENST00000498808 RPAINQ86UA6 219 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 TMEM192Q8IY95 271 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 PPTC7Q8NI37 304 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-236ENST00000498808 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
HDAC6-236ENST00000498808 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 MUTYHQ9UIF7 546 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 C5orf42Q9H799 3197 aa18.32■□□□□ 0.52
HDAC6-236ENST00000498808 RALGAPA2Q2PPJ7 1873 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-236ENST00000498808 STXBP2Q15833 593 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 SERINC5Q86VE9 423 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 TOP1MTQ969P6 601 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 MFSD14AQ96MC6 490 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 OSBPL7Q9BZF2 842 aa18.31■□□□□ 0.52
HDAC6-236ENST00000498808 UPF3BQ9BZI7 483 aaKnown RBP18.31■□□□□ 0.52
HDAC6-236ENST00000498808 TRIOO75962 3097 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 THPOP40225 353 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 DLX2Q07687 328 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-236ENST00000498808 LAMC2Q13753 1193 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
HDAC6-236ENST00000498808 CTC1Q2NKJ3 1217 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 HERC4Q5GLZ8 1057 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-236ENST00000498808 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 DHX37Q8IY37 1157 aaKnown RBP18.3■□□□□ 0.52
HDAC6-236ENST00000498808 PRSS33Q8NF86 280 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 MAF1Q9H063 256 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 MRVI1Q9Y6F6 885 aa18.3■□□□□ 0.52
HDAC6-236ENST00000498808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-236ENST00000498808 UPP2O95045 317 aa18.29■□□□□ 0.52
HDAC6-236ENST00000498808 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
HDAC6-236ENST00000498808 ALX1Q15699 326 aa18.29■□□□□ 0.52
HDAC6-236ENST00000498808 CLUL1Q15846 466 aa18.29■□□□□ 0.52
HDAC6-236ENST00000498808 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-236ENST00000498808 ABCB11O95342 1321 aa18.28■□□□□ 0.52
HDAC6-236ENST00000498808 MBTPS2O43462 519 aa18.28■□□□□ 0.52
HDAC6-236ENST00000498808 HSDL1Q3SXM5 330 aa18.28■□□□□ 0.52
HDAC6-236ENST00000498808 GPATCH4Q5T3I0 446 aaKnown RBP18.28■□□□□ 0.52
HDAC6-236ENST00000498808 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
HDAC6-236ENST00000498808 TTC14Q96N46 770 aa18.28■□□□□ 0.52
HDAC6-236ENST00000498808 SORBS3O60504 671 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 PPFIA4O75335 1185 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
HDAC6-236ENST00000498808 RGS20O76081 388 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 FGAP02671 866 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 NR3C2P08235 984 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 LINC00271P0C7V0 271 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 HOXC8P31273 242 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 HYAL1Q12794 435 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 ARHGEF16Q5VV41 709 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 MYSM1Q5VVJ2 828 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 SEPT8Q92599 483 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 POP1Q99575 1024 aaKnown RBP18.27■□□□□ 0.52
HDAC6-236ENST00000498808 PXMP2Q9NR77 195 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 USP34Q70CQ2 3546 aa18.27■□□□□ 0.52
HDAC6-236ENST00000498808 MYH6P13533 1939 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 NCK2O43639 380 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 TBX10O75333 385 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 IER5LQ5T953 404 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 MIER1Q8N108 512 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 EDAQ92838 391 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 C16orf70Q9BSU1 422 aa18.26■□□□□ 0.51
HDAC6-236ENST00000498808 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
HDAC6-236ENST00000498808 C17orf102A2RUQ5 167 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 C5orf67F2Z3F1 127 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 GRM6O15303 877 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 TREHO43280 583 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 CTSHP09668 335 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 CTNNB1P35222 781 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 GTF2F1P35269 517 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDAC6-236ENST00000498808 HAND2P61296 217 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 SMAD4Q13485 552 aaKnown RBP18.25■□□□□ 0.51
HDAC6-236ENST00000498808 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
HDAC6-236ENST00000498808 BMP8AQ7Z5Y6 402 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 ATP6V0A1Q93050 837 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 SPATA33Q96N06 139 aa18.25■□□□□ 0.51
HDAC6-236ENST00000498808 ZDBF2Q9HCK1 2354 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 GGPS1O95749 300 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 PTPN5P54829 565 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 QRICH1Q2TAL8 776 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 FIBCD1Q8N539 461 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 LMAN2LQ9H0V9 348 aa18.24■□□□□ 0.51
HDAC6-236ENST00000498808 ZMYM6O95789 1325 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 STXBP3O00186 592 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 OPLAHO14841 1288 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 LINC01565O15544 149 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 ST18O60284 1047 aa18.23■□□□□ 0.51
HDAC6-236ENST00000498808 RB1P06400 928 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms