RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 APOBRQ0VD83 1088 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 NEDD9Q14511 834 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 FAM109BQ6ICB4 259 aaPredicted RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 PPP1R18Q6NYC8 613 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 SESTD1Q86VW0 696 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 KAT2BQ92831 832 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 ZFP91Q96JP5 570 aaPredicted RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 RNPC3Q96LT9 517 aaKnown RBP20.08■□□□□ 0.81
ATG3-205ENST00000488910 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
ATG3-205ENST00000488910 SPDYE3A6NKU9 549 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 FIBPO43427 364 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 ADD1P35611 737 aaKnown RBP20.07■□□□□ 0.8
ATG3-205ENST00000488910 SMAD3P84022 425 aaKnown RBP20.07■□□□□ 0.8
ATG3-205ENST00000488910 WWC2Q6AWC2 1192 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 NLRX1Q86UT6 975 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 GPKOWQ92917 476 aaPredicted RBP eCLIP20.07■□□□□ 0.8
ATG3-205ENST00000488910 SENP7Q9BQF6 1050 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 ZSWIM6Q9HCJ5 1215 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 IL23AQ9NPF7 189 aa20.07■□□□□ 0.8
ATG3-205ENST00000488910 CYP2C9P11712 490 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 NAPAP54920 295 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 HSDL1Q3SXM5 330 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 TMEM240Q5SV17 173 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 PSRC1Q6PGN9 363 aaPredicted RBP20.06■□□□□ 0.8
ATG3-205ENST00000488910 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 C16orf59Q7L2K0 433 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 DEFB123Q8N688 67 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.06■□□□□ 0.8
ATG3-205ENST00000488910 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 EHMT1Q9H9B1 1298 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 RIC8AQ9NPQ8 531 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 BARHL2Q9NY43 387 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 PCDHA6Q9UN73 950 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 PCDHA8Q9Y5H6 950 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 NID2Q14112 1375 aa20.06■□□□□ 0.8
ATG3-205ENST00000488910 F2P00734 622 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 PSEN2P49810 448 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 CCL23P55773 120 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 EVCP57679 992 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 CHMP4BP1P59074 171 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 UBE2SQ16763 222 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 METTL7BQ6UX53 244 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
ATG3-205ENST00000488910 GIMAP8Q8ND71 665 aaPredicted RBP20.05■□□□□ 0.8
ATG3-205ENST00000488910 CDHR1Q96JP9 859 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 NOD1Q9Y239 953 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
ATG3-205ENST00000488910 UMODL1Q5DID0 1318 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 STXBP3O00186 592 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 HAS3O00219 553 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 PITPNM1O00562 1244 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 MAFGO15525 162 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 FOSP01100 380 aaPredicted RBP20.04■□□□□ 0.8
ATG3-205ENST00000488910 ADCY7P51828 1080 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 SEMA3FQ13275 785 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 BFSP2Q13515 415 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 MFSD10Q14728 455 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 PTGISQ16647 500 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 ZNF365Q70YC5 407 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 C7orf31Q8N865 590 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 GPRASP2Q96D09 838 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 WNT8AQ9H1J5 351 aa20.04■□□□□ 0.8
ATG3-205ENST00000488910 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.03■□□□□ 0.8
ATG3-205ENST00000488910 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.03■□□□□ 0.8
ATG3-205ENST00000488910 SMCO2A6NFE2 343 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 NOP56O00567 594 aaKnown RBP20.03■□□□□ 0.8
ATG3-205ENST00000488910 FGBP02675 491 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 ACRP10323 421 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 PFKFB3Q16875 520 aaPredicted RBP20.03■□□□□ 0.8
ATG3-205ENST00000488910 KIAA0753Q2KHM9 967 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 TYW1BQ6NUM6 668 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 CYFIP1Q7L576 1253 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 PPP1R13LQ8WUF5 828 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 ALG1Q9BT22 464 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 MTIF3Q9H2K0 278 aaKnown RBP20.03■□□□□ 0.8
ATG3-205ENST00000488910 HDAC6Q9UBN7 1215 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 GTF2IRD1Q9UHL9 959 aa20.03■□□□□ 0.8
ATG3-205ENST00000488910 PRPF3O43395 683 aaKnown RBP20.02■□□□□ 0.8
ATG3-205ENST00000488910 SORBS3O60504 671 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
ATG3-205ENST00000488910 ZNF286BP0CG31 522 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 SCG2P13521 617 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 PDIA3P30101 505 aaKnown RBP20.02■□□□□ 0.8
ATG3-205ENST00000488910 RFC2P35250 354 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 RASIP1Q5U651 963 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 GDF6Q6KF10 455 aaPredicted RBP20.02■□□□□ 0.8
ATG3-205ENST00000488910 Q7L0L9 218 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 CCDC155Q8N6L0 562 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 HERVK_113Q902F9 699 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 C16orf70Q9BSU1 422 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 BCAS3Q9H6U6 928 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 MTMR10Q9NXD2 777 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 UBIAD1Q9Y5Z9 338 aa20.02■□□□□ 0.8
ATG3-205ENST00000488910 PFKMP08237 780 aa20.01■□□□□ 0.79
ATG3-205ENST00000488910 ITGB5P18084 799 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms