RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CWC22Q9HCG8 908 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-203ENST00000488146 BTBD7Q9P203 1132 aa3.25□□□□□ -1.89
DEPDC1-203ENST00000488146 ZNF214Q9UL59 606 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1-203ENST00000488146 USP20Q9Y2K6 914 aa3.25□□□□□ -1.89
DEPDC1-203ENST00000488146 CHMP3Q9Y3E7 222 aa3.25□□□□□ -1.89
DEPDC1-203ENST00000488146 GBF1Q92538 1859 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 MYH4Q9Y623 1939 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 KIF28PB7ZC32 967 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 VWA5AO00534 786 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 GPR182O15218 404 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 FOXD2O60548 495 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 DGAT1O75907 488 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 NR3C2P08235 984 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 SMARCA1P28370 1054 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 EIF1AXP47813 144 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR20EP86478 221 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR20CP86479 221 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR20DP86480 221 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR20BP86481 221 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRR20AP86496 221 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TRIM60Q495X7 471 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TMEM184AQ6ZMB5 413 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 SH3RF3Q8TEJ3 882 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 SSH1Q8WYL5 1049 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 P2RX5Q93086 422 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TTC14Q96N46 770 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 ASB16Q96NS5 453 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 UHRF1Q96T88 793 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 MAP3K14Q99558 947 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TXNRD2Q9NNW7 524 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 STARD7Q9NQZ5 370 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TMEM39AQ9NV64 488 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 KLK14Q9P0G3 267 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 TTC41PQ6P2S7 1318 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 ESPNB1AK53 854 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 CTAGE5O15320 804 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 MYCP01106 439 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 RAG1P15918 1043 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 ADD2P35612 726 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 RARSP54136 660 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 CBLBQ13191 982 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 PRKG1Q13976 671 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 COX20Q5RI15 118 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 LIAT1Q6ZQX7 453 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 RTL10Q7L3V2 364 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 DPP9Q86TI2 863 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 ZSCAN29Q8IWY8 852 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 GPR161Q8N6U8 529 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 USP38Q8NB14 1042 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 EHBP1Q8NDI1 1231 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 NEDD1Q8NHV4 660 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 NEK9Q8TD19 979 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 HELQQ8TDG4 1101 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 KIF1BPQ96EK5 621 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 AGBL1Q96MI9 1066 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 DNAJC2Q99543 621 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 HAUS7Q99871 368 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 RANBP17Q9H2T7 1088 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 ACAD9Q9H845 621 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 LRP2BPQ9P2M1 347 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 LZTS1Q9Y250 596 aa3.24□□□□□ -1.89
DEPDC1-203ENST00000488146 HAS3O00219 553 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 COBLO75128 1261 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ERCC3P19447 782 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 STAT3P40763 770 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 TLE2Q04725 743 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 DNM1Q05193 864 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 SMAD4Q13485 552 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ACVR2BQ13705 512 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 RRP1BQ14684 758 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 DUSP28Q4G0W2 176 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 SLC9A9Q8IVB4 645 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 C1orf216Q8TAB5 229 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 BADQ92934 168 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 FEZ1Q99689 392 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 DUSP9Q99956 384 aaKnown RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 LRRCC1Q9C099 1032 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 AP5M1Q9H0R1 490 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 PORCNQ9H237 461 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 FLRT1Q9NZU1 646 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 RAI14Q9P0K7 980 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ZMYND8Q9ULU4 1186 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 PPME1Q9Y570 386 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 MTCH2Q9Y6C9 303 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 DENND4AQ7Z401 1863 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 PTPRSQ13332 1948 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 FAM187AA6NFU0 413 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 F6X3S4 739 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 SMARCA5O60264 1052 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 GH2P01242 217 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 CYP2B6P20813 491 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 GRM5P41594 1212 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 EPHA4P54764 986 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ICA1Q05084 483 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 TFCP2Q12800 502 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 COASYQ13057 564 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 ZKSCAN2Q63HK3 967 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 MIGA2Q7L4E1 593 aa3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 GIMAP8Q8ND71 665 aaPredicted RBP3.23□□□□□ -1.89
DEPDC1-203ENST00000488146 RASGRP4Q8TDF6 673 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms