RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 NOD1Q9Y239 953 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 MRPL11Q9Y3B7 192 aaKnown RBP9.96□□□□□ -0.82
PRKCB-208ENST00000487674 HRO43593 1189 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 IQCF3P0C7M6 154 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 GHRHRQ02643 423 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 STXBP2Q15833 593 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 TMEM67Q5HYA8 995 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 SEPT14Q6ZU15 432 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 CAGE1Q8TC20 777 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 PHOSPHO2Q8TCD6 241 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 AFAP1L1Q8TED9 768 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 PPP1R13LQ8WUF5 828 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
PRKCB-208ENST00000487674 TAAR1Q96RJ0 339 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 ZSWIM5Q9P217 1185 aa9.95□□□□□ -0.82
PRKCB-208ENST00000487674 CHD7Q9P2D1 2997 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 NCOR1O75376 2440 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 TET1Q8NFU7 2136 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 TRIP12Q14669 1992 aaPredicted RBP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 PTPRSQ13332 1948 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 TK2O00142 265 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 BAIAP3O94812 1187 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 CA3P07451 260 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 MYOGP15173 224 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 EIF2AK2P19525 551 aaKnown RBP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 CASTP20810 708 aaKnown RBP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 HSD17B4P51659 736 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 CHMP4BP1P59074 171 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 RBL2Q08999 1139 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 DSG2Q14126 1118 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 PTGISQ16647 500 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 DGKDQ16760 1214 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 LY6KQ17RY6 165 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 IFIT1BQ5T764 474 aaKnown RBP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 ARHGEF16Q5VV41 709 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 KAT2BQ92831 832 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 ASB2Q96Q27 587 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 CTAGE1Q96RT6 745 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 AMNQ9BXJ7 453 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 FTOQ9C0B1 505 aaKnown RBP eCLIP9.94□□□□□ -0.82
PRKCB-208ENST00000487674 PXMP2Q9NR77 195 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
PRKCB-208ENST00000487674 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 OPLAHO14841 1288 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 EIF3JO75822 258 aaKnown RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 PARNO95453 639 aaKnown RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 F2P00734 622 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 CFBP00751 764 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 NR3C2P08235 984 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 SELPP16109 830 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 MRPS5P82675 430 aaKnown RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 SEC23AQ15436 765 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 CCDC85BQ15834 202 aaPredicted RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 GDF6Q6KF10 455 aaPredicted RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 LRRC8DQ7L1W4 858 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 CHST3Q7LGC8 479 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 HERC6Q8IVU3 1022 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 STAG2Q8N3U4 1231 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 PPTC7Q8NI37 304 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 MTMR8Q96EF0 704 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 KATNAL1Q9BW62 490 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 IL25Q9H293 177 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 VAT1LQ9HCJ6 419 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
PRKCB-208ENST00000487674 DDX41Q9UJV9 622 aaKnown RBP9.93□□□□□ -0.82
PRKCB-208ENST00000487674 MYH7BA7E2Y1 1941 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 KIF28PB7ZC32 967 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 KLRF2D3W0D1 207 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 ZBTB5O15062 677 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 PPP1R11O60927 126 aaPredicted RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 ZNF286BP0CG31 522 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 HOXD8P13378 290 aaPredicted RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 POU3F3P20264 500 aaPredicted RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 KCNJ6P48051 423 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 TRAF1Q13077 416 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 MICALL1Q8N3F8 863 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 SAMD3Q8N6K7 520 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 C7orf31Q8N865 590 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 ADAMTS19Q8TE59 1207 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 DHX38Q92620 1227 aaKnown RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 YTHDC1Q96MU7 727 aaKnown RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 PDCD2LQ9BRP1 358 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 MAD2L2Q9UI95 211 aa9.92□□□□□ -0.82
PRKCB-208ENST00000487674 PRRC2BQ5JSZ5 2229 aaKnown RBP9.92□□□□□ -0.82
PRKCB-208ENST00000487674 TRANK1O15050 2925 aa9.91□□□□□ -0.82
PRKCB-208ENST00000487674 PALM3A6NDB9 673 aaPredicted RBP9.91□□□□□ -0.82
PRKCB-208ENST00000487674 HAS3O00219 553 aa9.91□□□□□ -0.82
PRKCB-208ENST00000487674 CXCL10P02778 98 aa9.91□□□□□ -0.82
PRKCB-208ENST00000487674 GSPT1P15170 499 aaKnown RBP9.91□□□□□ -0.82
PRKCB-208ENST00000487674 WDR5P61964 334 aaKnown RBP9.91□□□□□ -0.82
PRKCB-208ENST00000487674 TAP1Q03518 808 aa9.91□□□□□ -0.82
PRKCB-208ENST00000487674 TRDNQ13061 729 aa9.91□□□□□ -0.82
PRKCB-208ENST00000487674 MFSD10Q14728 455 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms