RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 HSDL1Q3SXM5 330 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 BMP2KLQ5H9B9 411 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 SRBD1Q8N5C6 995 aaKnown RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
NUP50-215ENST00000484186 CUL5Q93034 780 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 FTOQ9C0B1 505 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUP50-215ENST00000484186 PRDM12Q9H4Q4 367 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 MLXIPQ9HAP2 919 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 YBX2Q9Y2T7 364 aaKnown RBP10.89□□□□□ -0.67
NUP50-215ENST00000484186 PCDHA11Q9Y5I1 949 aa10.89□□□□□ -0.67
NUP50-215ENST00000484186 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 SORBS3O60504 671 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 PLEKHA8P1O95397 391 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 ZNF286BP0CG31 522 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 SELPP16109 830 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 RXRAP19793 462 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
NUP50-215ENST00000484186 ICAM3P32942 547 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
NUP50-215ENST00000484186 USP17L6PQ6QN14 398 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 PHOSPHO2Q8TCD6 241 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
NUP50-215ENST00000484186 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
NUP50-215ENST00000484186 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 SLC12A7Q9Y666 1083 aa10.88□□□□□ -0.67
NUP50-215ENST00000484186 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 MEIS2O14770 477 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 PARNO95453 639 aaKnown RBP10.87□□□□□ -0.67
NUP50-215ENST00000484186 CKBP12277 381 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 MYOGP15173 224 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 RBL2Q08999 1139 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 PTK7Q13308 1070 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 NEDD9Q14511 834 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 RNF20Q5VTR2 975 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 XRRA1Q6P2D8 792 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 LRRC8DQ7L1W4 858 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 SGMS1Q86VZ5 419 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 CMTR1Q8N1G2 835 aaKnown RBP10.87□□□□□ -0.67
NUP50-215ENST00000484186 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 SLC9A7Q96T83 725 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
NUP50-215ENST00000484186 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
NUP50-215ENST00000484186 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 H3BRB1 525 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 FIBPO43427 364 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
NUP50-215ENST00000484186 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 GPNMBQ14956 572 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 PPP2R2DQ66LE6 453 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 CYFIP1Q7L576 1253 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 NLRX1Q86UT6 975 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 NEK1Q96PY6 1258 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 USP26Q9BXU7 913 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 TUT1Q9H6E5 874 aaKnown RBP10.86□□□□□ -0.67
NUP50-215ENST00000484186 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
NUP50-215ENST00000484186 hCG_1642624A0A1W2PR95 340 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 C17orf102A2RUQ5 167 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 KIF28PB7ZC32 967 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
NUP50-215ENST00000484186 NBNO60934 754 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 CXCL10P02778 98 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 LGALS2P05162 132 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 IGFBP4P22692 258 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
NUP50-215ENST00000484186 HIC1Q14526 733 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 TRIM71Q2Q1W2 868 aaKnown RBP10.85□□□□□ -0.67
NUP50-215ENST00000484186 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 METTL7BQ6UX53 244 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 TMTC3Q6ZXV5 915 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
NUP50-215ENST00000484186 HERC6Q8IVU3 1022 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 PPM1EQ8WY54 764 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 GPR20Q99678 358 aa10.85□□□□□ -0.67
NUP50-215ENST00000484186 TRIP12Q14669 1992 aaPredicted RBP10.85□□□□□ -0.67
NUP50-215ENST00000484186 CDC45O75419 566 aa10.84□□□□□ -0.67
NUP50-215ENST00000484186 CA3P07451 260 aa10.84□□□□□ -0.67
NUP50-215ENST00000484186 KCNJ6P48051 423 aa10.84□□□□□ -0.67
NUP50-215ENST00000484186 CNKSR3Q6P9H4 555 aa10.84□□□□□ -0.67
NUP50-215ENST00000484186 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms