RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 PRPHP41219 470 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 FAM20AQ96MK3 541 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 WDR11Q9BZH6 1224 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 VTA1Q9NP79 307 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 CNPY2Q9Y2B0 182 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 PPP6R2O75170 966 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 TGFB3P10600 412 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 CEBPZQ03701 1054 aaKnown RBP23.47■■□□□ 1.35
RXRB-204ENST00000483281 KCNV1Q6PIU1 500 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 CHAMP1Q96JM3 812 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 ABHD16BQ9H3Z7 469 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 KCNH7Q9NS40 1196 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.47■■□□□ 1.35
RXRB-204ENST00000483281 FLRT1Q9NZU1 646 aa23.47■■□□□ 1.35
RXRB-204ENST00000483281 SPATA31C2B4DYI2 1134 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 MTMR1Q13613 665 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 STK38Q15208 465 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 POTEDQ86YR6 584 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 ETNPPLQ8TBG4 499 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 KCNG4Q8TDN1 519 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 LEO1Q8WVC0 666 aaPredicted RBP23.46■■□□□ 1.35
RXRB-204ENST00000483281 GBP4Q96PP9 640 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 TMEM60Q9H2L4 133 aa23.46■■□□□ 1.35
RXRB-204ENST00000483281 RBM47A0AV96 593 aaKnown RBP23.45■■□□□ 1.35
RXRB-204ENST00000483281 GOLGA6L3A6NEY3 463 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 SPTLC2O15270 562 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 FIBPO43427 364 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 NCLP19338 710 aaKnown RBP23.45■■□□□ 1.35
RXRB-204ENST00000483281 CALCRLQ16602 461 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 SLFN12Q8IYM2 578 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 HAS1Q92839 578 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 ZFP91Q96JP5 570 aaPredicted RBP23.45■■□□□ 1.35
RXRB-204ENST00000483281 SPATA32Q96LK8 384 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 KATNBL1Q9H079 304 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 NRBP1Q9UHY1 535 aa23.45■■□□□ 1.35
RXRB-204ENST00000483281 MSH4O15457 936 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 OR52Z1P0C646 297 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 ARP10275 920 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 MCM4P33991 863 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 CCL14Q16627 93 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 PXYLP1Q8TE99 480 aa23.45■■□□□ 1.34
RXRB-204ENST00000483281 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
RXRB-204ENST00000483281 ELP1O95163 1332 aa23.44■■□□□ 1.34
RXRB-204ENST00000483281 HSPA8P11142 646 aaKnown RBP23.44■■□□□ 1.34
RXRB-204ENST00000483281 CSPP1Q1MSJ5 1256 aa23.44■■□□□ 1.34
RXRB-204ENST00000483281 SLC5A5Q92911 643 aa23.44■■□□□ 1.34
RXRB-204ENST00000483281 FERMT2Q96AC1 680 aa23.44■■□□□ 1.34
RXRB-204ENST00000483281 AGO4Q9HCK5 861 aaKnown RBP23.44■■□□□ 1.34
RXRB-204ENST00000483281 SRPRBQ9Y5M8 271 aaKnown RBP23.44■■□□□ 1.34
RXRB-204ENST00000483281 FOXN1O15353 648 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 TAPT1Q6NXT6 567 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 OTOP1Q7RTM1 612 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 RIT2Q99578 217 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 SENP7Q9BQF6 1050 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
RXRB-204ENST00000483281 SEMA3FQ13275 785 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 ACVR2BQ13705 512 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 TMEM87AQ8NBN3 555 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 ZNF577Q9BSK1 485 aa23.43■■□□□ 1.34
RXRB-204ENST00000483281 IPO5O00410 1097 aaKnown RBP23.42■■□□□ 1.34
RXRB-204ENST00000483281 MFSD14CQ5VZR4 134 aa23.42■■□□□ 1.34
RXRB-204ENST00000483281 SEPT14Q6ZU15 432 aa23.42■■□□□ 1.34
RXRB-204ENST00000483281 TBC1D22BQ9NU19 505 aa23.42■■□□□ 1.34
RXRB-204ENST00000483281 HSPA1AP0DMV8 641 aaKnown RBP23.41■■□□□ 1.34
RXRB-204ENST00000483281 HSPA1BP0DMV9 641 aaKnown RBP23.41■■□□□ 1.34
RXRB-204ENST00000483281 PDIA5Q14554 519 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 DTHD1Q6ZMT9 781 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 SCFD2Q8WU76 684 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 TRIB2Q92519 343 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 PCDHA12Q9UN75 941 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 ADCY3O60266 1144 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 MARCH6O60337 910 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 PSMD10O75832 226 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 FXR2P51116 673 aaKnown RBP eCLIP23.41■■□□□ 1.34
RXRB-204ENST00000483281 IQSEC1Q6DN90 963 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 CCDC62Q6P9F0 684 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 EEPD1Q7L9B9 569 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 GIMAP8Q8ND71 665 aaPredicted RBP23.41■■□□□ 1.34
RXRB-204ENST00000483281 RAET1EQ8TD07 263 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 DDX41Q9UJV9 622 aaKnown RBP23.41■■□□□ 1.34
RXRB-204ENST00000483281 FBXO2Q9UK22 296 aaPredicted RBP23.41■■□□□ 1.34
RXRB-204ENST00000483281 MRVI1Q9Y6F6 885 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 NFASCO94856 1347 aa23.41■■□□□ 1.34
RXRB-204ENST00000483281 DHX15O43143 795 aaKnown RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 MARCKSP29966 332 aaPredicted RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 FBXO16Q8IX29 292 aaPredicted RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 KRI1Q8N9T8 703 aaKnown RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 ATP9AO75110 1047 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 ZNF865P0CJ78 1059 aaPredicted RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 KCNA2P16389 499 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 CYP2C19P33261 490 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 TXKP42681 527 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 TTLL4Q14679 1199 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 IL17AQ16552 155 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 ZNF579Q8NAF0 562 aaKnown RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 TTC12Q9H892 705 aaPredicted RBP23.4■■□□□ 1.34
RXRB-204ENST00000483281 GDPD2Q9HCC8 539 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 PCDHA7Q9UN72 937 aa23.4■■□□□ 1.34
RXRB-204ENST00000483281 CUTAO60888 179 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms