RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 EYA1Q99502 592 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 GINS2Q9Y248 185 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 ARHGEF35A5YM69 484 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 ZNF233A6NK53 670 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 POLR2DO15514 142 aaKnown RBP12.51□□□□□ -0.41
U2AF1-209ENST00000475639 EVI5O60447 810 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 NR1D1P20393 614 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 VPS41P49754 854 aa12.51□□□□□ -0.41
U2AF1-209ENST00000475639 MDH1P40925 334 aaKnown RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 EPHB4P54760 987 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 HERVK_113P62684 666 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 XRCC4Q13426 336 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 BZW1Q7L1Q6 419 aaKnown RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 RSBN1LQ6PCB5 846 aaPredicted RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 STAMBPL1Q96FJ0 436 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 GOLGA8QA0A0J9YX86 632 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 GOLGA8OA6NCC3 632 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 GOLGA8NF8WBI6 632 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 PPARAQ07869 468 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 ASPHQ12797 758 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 BIN2Q9UBW5 565 aaPredicted RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 CALUO43852 315 aaPredicted RBP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 SCTRP47872 440 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 EFHD1Q9BUP0 239 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 EBF2Q9HAK2 575 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
U2AF1-209ENST00000475639 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 PALLDQ8WX93 1383 aa12.5□□□□□ -0.41
U2AF1-209ENST00000475639 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 MMEL1Q495T6 779 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 HERC4Q5GLZ8 1057 aaPredicted RBP12.49□□□□□ -0.41
U2AF1-209ENST00000475639 MMGT1Q8N4V1 131 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
U2AF1-209ENST00000475639 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CLTAP09496 248 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CDC25CP30307 473 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 SERPINB6P35237 376 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 MYO1EQ12965 1108 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CAVIN3Q969G5 261 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 LRGUKQ96M69 825 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 KRT12Q99456 494 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 RIMBP3CA6NJZ7 1639 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 RIMBP3BA6NNM3 1639 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 RIMBP3Q9UFD9 1639 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 EXOC3O60645 756 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
U2AF1-209ENST00000475639 LMBR1LQ6UX01 489 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 IQCKQ8N0W5 287 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 AMOTL2Q9Y2J4 779 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
U2AF1-209ENST00000475639 MRC1P22897 1456 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 HSPD1P10809 573 aaKnown RBP12.49□□□□□ -0.41
U2AF1-209ENST00000475639 ATICP31939 592 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 KIF11P52732 1056 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 THEMIS2Q5TEJ8 643 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 CREG2Q8IUH2 290 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
U2AF1-209ENST00000475639 RAB27AP51159 221 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 QPCTQ16769 361 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 CAPRIN2Q6IMN6 1127 aaKnown RBP12.48□□□□□ -0.41
U2AF1-209ENST00000475639 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 BABAM1Q9NWV8 329 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 RCCD1A6NED2 376 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
U2AF1-209ENST00000475639 IQCDQ96DY2 449 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 PSMB7Q99436 277 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 FMN2Q9NZ56 1722 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 COBLO75128 1261 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 SESN3P58005 492 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 KRT40Q6A162 431 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 PDZD4Q76G19 769 aaPredicted RBP12.48□□□□□ -0.41
U2AF1-209ENST00000475639 FAM186BQ8IYM0 893 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 SMYD4Q8IYR2 804 aaPredicted RBP12.48□□□□□ -0.41
U2AF1-209ENST00000475639 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 TEKT1Q969V4 418 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms