RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 RELL1Q8IUW5 271 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 DRC7Q8IY82 874 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 PHC3Q8NDX5 983 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 CCDC112Q8NEF3 446 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 CD99L2Q8TCZ2 262 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 SPOCK3Q9BQ16 436 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 CORO1BQ9BR76 489 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 HTATIP2Q9BUP3 242 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 TM6SF1Q9BZW5 370 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 DDX19AQ9NUU7 478 aaKnown RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 KBTBD4Q9NVX7 518 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 USP16Q9Y5T5 823 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 ELP1O95163 1332 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 UBR2Q8IWV8 1755 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 PAPPA2Q9BXP8 1791 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ZNF609O15014 1411 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 COL3A1P02461 1466 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 A0A1W2PPC1 479 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GNAT3A8MTJ3 354 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GOLGA6L19H0YKK7 550 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 CHL1O00533 1208 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 STX6O43752 255 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GSPT1P15170 499 aaKnown RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 SELPP16109 830 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GSDMDP57764 484 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ATP8B2P98198 1209 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GPS2Q13227 327 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ARHGEF6Q15052 776 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 GRIK4Q16099 956 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 HP1BP3Q5SSJ5 553 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 RASIP1Q5U651 963 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 CCDC30Q5VVM6 783 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 LLGL2Q6P1M3 1020 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 KIF6Q6ZMV9 814 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ZNF771Q7L3S4 317 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 PPP1R42Q7Z4L9 355 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 NT5DC4Q86YG4 428 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ERC1Q8IUD2 1116 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 SIRT2Q8IXJ6 389 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 TMEM130Q8N3G9 435 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 KIAA1524Q8TCG1 905 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ANKRD7Q92527 254 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 LENG1Q96BZ8 264 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ZNF333Q96JL9 665 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 RHOVQ96L33 236 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 TMEM74Q96NL1 305 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 R3HDMLQ9H3Y0 253 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 COPRSQ9NQ92 184 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 KRT82Q9NSB4 513 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ARGLU1Q9NWB6 273 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 CACNA2D2Q9NY47 1150 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 CFAP45Q9UL16 551 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 NR2E3Q9Y5X4 410 aa5.67□□□□□ -1.5
LRCH3-214ENST00000473177 ASTN2O75129 1339 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-214ENST00000473177 AKAP11Q9UKA4 1901 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 MANSC4A6NHS7 340 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ATP8B1O43520 1251 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ECE2O60344 883 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ADAM23O75077 832 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 BBOX1O75936 387 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 WISP1O95388 367 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ECEL1O95672 775 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 DLGAP3O95886 979 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ZSCAN20P17040 1043 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 GBP2P32456 591 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 HSPA4P34932 840 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 IL13P35225 146 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 INHBEP58166 350 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 RAD51AP2Q09MP3 1159 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 PRKG1Q13976 671 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 KRT32Q14532 448 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 BMS1Q14692 1282 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ZRSR1Q15695 479 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 VPS53Q5VIR6 699 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 OTUD7BQ6GQQ9 843 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 SHISA2Q6UWI4 295 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 DDX46Q7L014 1031 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 ARMC9Q7Z3E5 817 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 KRT222Q8N1A0 295 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 DEFB123Q8N688 67 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 GRIN3AQ8TCU5 1115 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 UBASH3BQ8TF42 649 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 NACC1Q96RE7 527 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 DNAJC2Q99543 621 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 SRRTQ9BXP5 876 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 KCNQ5Q9NR82 932 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 DDX41Q9UJV9 622 aaKnown RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 TLR6Q9Y2C9 796 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 STXBP5LQ9Y2K9 1186 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms