RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PBX4Q9BYU1 374 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 MTIF3Q9H2K0 278 aaKnown RBP10.41□□□□□ -0.74
USF1-204ENST00000472217 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 SCN5AQ14524 2016 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 MYH7BA7E2Y1 1941 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 HAS3O00219 553 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 MEIS2O14770 477 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 STAM2O75886 525 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 F2P00734 622 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 PSEN2P49810 448 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
USF1-204ENST00000472217 MFSD10Q14728 455 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 PTGISQ16647 500 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 GNPTABQ3T906 1256 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 GDF6Q6KF10 455 aaPredicted RBP10.4□□□□□ -0.74
USF1-204ENST00000472217 DEFB128Q7Z7B8 93 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 RPUSD2Q8IZ73 545 aaKnown RBP10.4□□□□□ -0.74
USF1-204ENST00000472217 SLC17A8Q8NDX2 589 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 MYLIPQ8WY64 445 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 CUL5Q93034 780 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 SPATA33Q96N06 139 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 ALG1Q9BT22 464 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 GTF2IRD1Q9UHL9 959 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
USF1-204ENST00000472217 GBF1Q92538 1859 aa10.4□□□□□ -0.75
USF1-204ENST00000472217 CNTNAP5Q8WYK1 1306 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 PPFIA4O75335 1185 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 PFKMP08237 780 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 IQCF3P0C7M6 154 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 ICAM3P32942 547 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 BFSP2Q13515 415 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 KRT32Q14532 448 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 GRIN2CQ14957 1233 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 KIAA0753Q2KHM9 967 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 PCNX4Q63HM2 1172 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
USF1-204ENST00000472217 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 RETREG2Q8NC44 543 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 DHX38Q92620 1227 aaKnown RBP10.39□□□□□ -0.75
USF1-204ENST00000472217 TIFAQ96CG3 184 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 ZNF576Q9H609 170 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 HDAC6Q9UBN7 1215 aa10.39□□□□□ -0.75
USF1-204ENST00000472217 DOCK5Q9H7D0 1870 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 ZBTB43O43298 467 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 FIBPO43427 364 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 CPA1P15085 419 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 RFC2P35250 354 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 FUT2Q10981 343 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 UBE2SQ16763 222 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 HEATR3Q7Z4Q2 680 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 AFAP1L1Q8TED9 768 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 C16orf70Q9BSU1 422 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 PSTPIP2Q9H939 334 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 RBM28Q9NW13 759 aaKnown RBP10.38□□□□□ -0.75
USF1-204ENST00000472217 YBX2Q9Y2T7 364 aaKnown RBP10.38□□□□□ -0.75
USF1-204ENST00000472217 SLC4A7Q9Y6M7 1214 aa10.38□□□□□ -0.75
USF1-204ENST00000472217 KLF18A0A0U1RQI7 1052 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 GOLGA8AA7E2F4 631 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 GOLGA8BA8MQT2 603 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
USF1-204ENST00000472217 LGALS2P05162 132 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 HMGB1P09429 215 aaKnown RBP10.37□□□□□ -0.75
USF1-204ENST00000472217 FOSL2P15408 326 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 SELPP16109 830 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 CDC27P30260 824 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 ZNF200P98182 395 aaPredicted RBP10.37□□□□□ -0.75
USF1-204ENST00000472217 RBL2Q08999 1139 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 NEDD9Q14511 834 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 HIC1Q14526 733 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 RAB30Q15771 203 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 RTN1Q16799 776 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 WWC2Q6AWC2 1192 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 METTL7BQ6UX53 244 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 LRRC8DQ7L1W4 858 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 CYFIP1Q7L576 1253 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 MAFAQ8NHW3 353 aaPredicted RBP10.37□□□□□ -0.75
USF1-204ENST00000472217 KCNB2Q92953 911 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 WNT8BQ93098 351 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
USF1-204ENST00000472217 NKX2-4Q9H2Z4 354 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 FAM217BQ9NTX9 383 aaPredicted RBP10.37□□□□□ -0.75
USF1-204ENST00000472217 MSRAQ9UJ68 235 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 TELO2Q9Y4R8 837 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 SNX14Q9Y5W7 946 aa10.37□□□□□ -0.75
USF1-204ENST00000472217 SPDYE3A6NKU9 549 aa10.36□□□□□ -0.75
USF1-204ENST00000472217 H3BRB1 525 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms