RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 COL12A1Q99715 3063 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 TM4SF5O14894 197 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 LILRB5O75023 590 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 LRP3O75074 770 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 PPFIA3O75145 1194 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 LRRN2O75325 713 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 BAG3O95817 575 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 WEE2P0C1S8 567 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 ADORA1P30542 326 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 SRSF1Q07955 248 aaKnown RBP eCLIP8.08□□□□□ -1.12
HDAC3-206ENST00000471968 BTG3Q14201 252 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-206ENST00000471968 CSRP2Q16527 193 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 CES5AQ6NT32 575 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 TBC1D9Q6ZT07 1266 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 ATG9AQ7Z3C6 839 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 ZNF605Q86T29 641 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 KLHL23Q8NBE8 558 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 OR6J1Q8NGC5 347 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 CDCA3Q99618 268 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-206ENST00000471968 SCNM1Q9BWG6 230 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 WNT16Q9UBV4 365 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 SRPK3Q9UPE1 567 aa8.08□□□□□ -1.12
HDAC3-206ENST00000471968 PDS5AQ29RF7 1337 aaKnown RBP8.07□□□□□ -1.12
HDAC3-206ENST00000471968 ASB14A6NK59 587 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 C1QL1O75973 258 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 RETP07949 1114 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 PLCG2P16885 1265 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 HOXB8P17481 243 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-206ENST00000471968 SHMT1P34896 483 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 DUSP28Q4G0W2 176 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 AASDHQ4L235 1098 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-206ENST00000471968 PLEKHG4Q58EX7 1191 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 BRDTQ58F21 947 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-206ENST00000471968 LAIR1Q6GTX8 287 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 SLC4A10Q6U841 1118 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 TMEM184AQ6ZMB5 413 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 CPXCR1Q8N123 301 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 WNT8BQ93098 351 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 VCPKMTQ9H867 229 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
HDAC3-206ENST00000471968 RELNP78509 3460 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 USP17L21D6R901 530 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 J3QKU1 62 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 EYA2O00167 538 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 LIMK1P53667 647 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 GNAI1P63096 354 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 ZNF252P-AS1Q0IIN9 211 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 KCNC3Q14003 757 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 NAALADL2Q58DX5 795 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 TSSK4Q6SA08 328 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 SEPT8Q92599 483 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 FOXQ1Q9C009 403 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 ADAM7Q9H2U9 754 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 KCNK12Q9HB15 430 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 DBR1Q9UK59 544 aaKnown RBP8.06□□□□□ -1.12
HDAC3-206ENST00000471968 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 PARP14Q460N5 1801 aa8.06□□□□□ -1.12
HDAC3-206ENST00000471968 RSPH10B2B2RC85 870 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 RAD21O60216 631 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 KPNA6O60684 536 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 SEC24BO95487 1268 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 EOMESO95936 686 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 NBPF7P0C2Y1 421 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 RSPH10BP0C881 870 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 MTHFRP42898 656 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 ITIH3Q06033 890 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 TRIM71Q2Q1W2 868 aaKnown RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 RABL6Q3YEC7 729 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 PHLDB3Q6NSJ2 640 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 SESTD1Q86VW0 696 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 PROSER1Q86XN7 944 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 ANKRD44Q8N8A2 993 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 PJA1Q8NG27 643 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 LRIG1Q96JA1 1093 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 PURBQ96QR8 312 aaKnown RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 EHD4Q9H223 541 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 FBXO40Q9UH90 709 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 MRPL42Q9Y6G3 142 aaKnown RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 UBR5O95071 2799 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-206ENST00000471968 ASXL3Q9C0F0 2248 aa8.05□□□□□ -1.12
HDAC3-206ENST00000471968 RAD50Q92878 1312 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 GIPC1O14908 333 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 ZBTB22O15209 634 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 FOXD2O60548 495 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-206ENST00000471968 NTRK1P04629 796 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
HDAC3-206ENST00000471968 PTK7Q13308 1070 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 FAM83BQ5T0W9 1011 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms