RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 MED19A0JLT2 244 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-213ENST00000471667 ICMTO60725 284 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 NTSR2O95665 410 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 NEFLP07196 543 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 ITPKAP23677 461 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 TNNI2P48788 182 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 RTP1P59025 263 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 GPSM2P81274 684 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 FPGSQ05932 587 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 PPIL2Q13356 520 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 VGLL4Q14135 290 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 NBPF12Q5TAG4 269 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-213ENST00000471667 OGFOD3Q6PK18 319 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 NGEFQ8N5V2 710 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 POU5F2Q8N7G0 328 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 BCL7CQ8WUZ0 217 aaPredicted RBP4.78□□□□□ -1.64
LRCH3-213ENST00000471667 WDR18Q9BV38 432 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 EHD4Q9H223 541 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 POLKQ9UBT6 870 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 BRPF3Q9ULD4 1205 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 PPP1R9AQ9ULJ8 1098 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 SLC5A6Q9Y289 635 aa4.78□□□□□ -1.64
LRCH3-213ENST00000471667 DDX60LQ5H9U9 1706 aaKnown RBP4.77□□□□□ -1.65
LRCH3-213ENST00000471667 EPG5Q9HCE0 2579 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 MSCO60682 206 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 RAG1P15918 1043 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 JAG1P78504 1218 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 DMWDQ09019 674 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 AP3B2Q13367 1082 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 ORC1Q13415 861 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 PUM1Q14671 1186 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRCH3-213ENST00000471667 PLCL1Q15111 1095 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 HSP90AB3PQ58FF7 597 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 EPHA10Q5JZY3 1008 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 STRIP1Q5VSL9 837 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 MCTP2Q6DN12 878 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF574Q6ZN55 896 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-213ENST00000471667 AEBP1Q8IUX7 1158 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 PRSS33Q8NF86 280 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 NPHS2Q9NP85 383 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 EGFL7Q9UHF1 273 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 USP16Q9Y5T5 823 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 LAMB1P07942 1786 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 ATRNL1Q5VV63 1379 aa4.77□□□□□ -1.65
LRCH3-213ENST00000471667 SH3TC1Q8TE82 1336 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 H3BRB1 525 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 PAPLNO95428 1278 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 C8AP07357 584 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 HSP90B1P14625 803 aaKnown RBP4.76□□□□□ -1.65
LRCH3-213ENST00000471667 RBM5P52756 815 aaKnown RBP eCLIP4.76□□□□□ -1.65
LRCH3-213ENST00000471667 PPATQ06203 517 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 RASA3Q14644 834 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 ECM1Q16610 540 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 SPRED2Q7Z698 418 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 WFDC3Q8IUB2 231 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 KIAA0825Q8IV33 1275 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 GLYCTKQ8IVS8 523 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 STK11IPQ8N1F8 1099 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 CDH23Q9H251 3354 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 TUT1Q9H6E5 874 aaKnown RBP4.76□□□□□ -1.65
LRCH3-213ENST00000471667 FAM86C1Q9NVL1 165 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 PODXL2Q9NZ53 605 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 TACC3Q9Y6A5 838 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 TCF20Q9UGU0 1960 aaKnown RBP4.76□□□□□ -1.65
LRCH3-213ENST00000471667 UBR2Q8IWV8 1755 aa4.76□□□□□ -1.65
LRCH3-213ENST00000471667 UBN2Q6ZU65 1347 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 DUOX1Q9NRD9 1551 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 KIF20BQ96Q89 1820 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 CLRN2A0PK11 232 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 KBTBD13C9JR72 458 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 DNM1LO00429 736 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 TMPRSS2O15393 492 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 NDUFB5O43674 189 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 CPNE3O75131 537 aaKnown RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 HCLS1P14317 486 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ZKSCAN1P17029 563 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 LIG1P18858 919 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 SERPINB4P48594 390 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ARHGAP4P98171 946 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF792Q3KQV3 632 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 CYP27C1Q4G0S4 372 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 DCAF15Q66K64 600 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 FASTKD5Q7L8L6 764 aaKnown RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF34Q8IZ26 560 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 NKD2Q969F2 451 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 WRNIP1Q96S55 665 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 CCDC86Q9H6F5 360 aaKnown RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ABCB6Q9NP58 842 aa4.75□□□□□ -1.65
LRCH3-213ENST00000471667 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF536O15090 1300 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 XDHP47989 1333 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PRR23AA6NEV1 266 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 GNAT3A8MTJ3 354 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PROB1E7EW31 1015 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 FAM87AP0C7U9 286 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms