RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, human

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT4-208	ENST00000465721	C7orf31	Q8N865	590 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	PNMA1	Q8ND90	353 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	SP7	Q8TDD2	431 aa	Predicted RBP	13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	RMDN3	Q96TC7	470 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	ZKSCAN3	Q9BRR0	538 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	C17orf80	Q9BSJ5	609 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	ALG1	Q9BT22	464 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	KATNAL1	Q9BW62	490 aa		13.77	□□□□□ -0.21
CNOT4-208	ENST00000465721	OPLAH	O14841	1288 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	LGR5	O75473	907 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	RGS20	O76081	388 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	IL9	P15248	144 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	EIF2AK2	P19525	551 aa	Known RBP	13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	KCNA5	P22460	613 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	HTRA4	P83105	476 aa	Predicted RBP	13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	ZNF200	P98182	395 aa	Predicted RBP	13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	DGKH	Q86XP1	1220 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	TICAM2	Q86XR7	235 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	GJD3	Q8N144	294 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	FBXO22	Q8NEZ5	403 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	ESR2	Q92731	530 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	PXMP2	Q9NR77	195 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	TECTA	O75443	2155 aa		13.76	□□□□□ -0.21
CNOT4-208	ENST00000465721	TTC3	P53804	2025 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	EMSY	Q7Z589	1322 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	PRR33	A8MZF0	331 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	EIF3J	O75822	258 aa	Known RBP	13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	GHRHR	Q02643	423 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	LAMC2	Q13753	1193 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	ASPRV1	Q53RT3	343 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	ARHGEF16	Q5VV41	709 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	MCF2L2	Q86YR7	1114 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	RNF41	Q9H4P4	317 aa	Predicted RBP	13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	MRVI1	Q9Y6F6	885 aa		13.75	□□□□□ -0.21
CNOT4-208	ENST00000465721	USP34	Q70CQ2	3546 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	ZDBF2	Q9HCK1	2354 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	NR3C2	P08235	984 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	HSD17B4	P51659	736 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	ANKRD45	Q5TZF3	282 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	SERINC5	Q86VE9	423 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	ENAH	Q8N8S7	591 aa	Predicted RBP	13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	DBF4B	Q8NFT6	615 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	ANKS1A	Q92625	1134 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	MRPL38	Q96DV4	380 aa	Known RBP	13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	CRBN	Q96SW2	442 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	MRPL11	Q9Y3B7	192 aa	Known RBP	13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	INSL6	Q9Y581	213 aa		13.74	□□□□□ -0.21
CNOT4-208	ENST00000465721	GRXCR2	A6NFK2	248 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	KDM4A	O75164	1064 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	AMH	P03971	560 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	HOXC8	P31273	242 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	NT5C2	P49902	561 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	COL19A1	Q14993	1142 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	HSDL1	Q3SXM5	330 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	PLEKHG4	Q58EX7	1191 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	MYSM1	Q5VVJ2	828 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	FBXO11	Q86XK2	927 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	DHX37	Q8IY37	1157 aa	Known RBP	13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	MYOCD	Q8IZQ8	938 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	IL31RA	Q8NI17	732 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	NEK9	Q8TD19	979 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	PDCD2L	Q9BRP1	358 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	C16orf70	Q9BSU1	422 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	KAT14	Q9H8E8	782 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	JMJD4	Q9H9V9	463 aa		13.73	□□□□□ -0.21
CNOT4-208	ENST00000465721	SORBS3	O60504	671 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	PPP1R11	O60927	126 aa	Predicted RBP	13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	GGPS1	O95749	300 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	CFB	P00751	764 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	UBA1	P22314	1058 aa	Known RBP	13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	SSTR3	P32745	418 aa	Predicted RBP	13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	EPC2	Q52LR7	807 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	TIGD5	Q53EQ6	642 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	CELF3	Q5SZQ8	465 aa	Known RBP	13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	IQCA1	Q86XH1	822 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	SPATA33	Q96N06	139 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	SAMD11	Q96NU1	681 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	OSBPL7	Q9BZF2	842 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	CACNA1H	O95180	2353 aa		13.72	□□□□□ -0.21
CNOT4-208	ENST00000465721	RSPH10B2	B2RC85	870 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721		B4E1Z4	1266 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721		H3BQ06	376 aa	Predicted RBP	13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	DHX16	O60231	1041 aa	Known RBP	13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	PPFIA4	O75335	1185 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	PARP1	P09874	1014 aa	Known RBP	13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	RSPH10B	P0C881	870 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	THPO	P40225	353 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	SP2	Q02086	613 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	CCDC178	Q5BJE1	867 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	STOX1	Q6ZVD7	989 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.71	□□□□□ -0.21	2e-9	■■■■■ 29.7
CNOT4-208	ENST00000465721	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	SSUH2	Q9Y2M2	353 aa		13.71	□□□□□ -0.21
CNOT4-208	ENST00000465721	KMT2E	Q8IZD2	1858 aa		13.7	□□□□□ -0.22
CNOT4-208	ENST00000465721	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.7	□□□□□ -0.22
CNOT4-208	ENST00000465721		H3BNC9	293 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms