RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 EXOSC10Q01780 885 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 KRT32Q14532 448 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 MFSD10Q14728 455 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 GNPTABQ3T906 1256 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 HEATR3Q7Z4Q2 680 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 RPUSD2Q8IZ73 545 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 SLC17A8Q8NDX2 589 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 CDX2Q99626 313 aaPredicted RBP22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 KATNAL1Q9BW62 490 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 MLXIPQ9HAP2 919 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 NAP1L2Q9ULW6 460 aaPredicted RBP22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 CNTNAP5Q8WYK1 1306 aa22.2■■□□□ 1.14
CCHCR1-210ENST00000464012 ZBBXA8MT70 800 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 ZBTB43O43298 467 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 CPA1P15085 419 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 PBX2P40425 430 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 UBE2SQ16763 222 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 RTN1Q16799 776 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 KIAA0753Q2KHM9 967 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 TSGA10IPQ3SY00 556 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 C7orf31Q8N865 590 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 RETREG2Q8NC44 543 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 MYLIPQ8WY64 445 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 HDAC6Q9UBN7 1215 aa22.19■■□□□ 1.14
CCHCR1-210ENST00000464012 KLF18A0A0U1RQI7 1052 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 PIK3CDO00329 1044 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 F2P00734 622 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 TGFB3P10600 412 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 FGD1P98174 961 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 BFSP2Q13515 415 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 TIFAQ96CG3 184 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 INPP4AQ96PE3 977 aaPredicted RBP22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 PBX4Q9BYU1 374 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 BCAS3Q9H6U6 928 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 PSTPIP2Q9H939 334 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 RBM28Q9NW13 759 aaKnown RBP22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 GTF2IRD1Q9UHL9 959 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 COL6A3P12111 3177 aa22.18■■□□□ 1.14
CCHCR1-210ENST00000464012 TMEM265A0A087WTH1 108 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 GOLGA8AA7E2F4 631 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 GOLGA8BA8MQT2 603 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 STAM2O75886 525 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 SEMA3FQ13275 785 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 PCNX4Q63HM2 1172 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 SESTD1Q86VW0 696 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 TET1Q8NFU7 2136 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 VWCEQ96DN2 955 aa22.17■■□□□ 1.14
CCHCR1-210ENST00000464012 HAS3O00219 553 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 PITPNM1O00562 1244 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 NOP56O00567 594 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 FIBPO43427 364 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 IQCF3P0C7M6 154 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 CYFIP1Q7L576 1253 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 CCDC155Q8N6L0 562 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 CTAGE1Q96RT6 745 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 PTPRSQ13332 1948 aa22.16■■□□□ 1.14
CCHCR1-210ENST00000464012 SPATA31C2B4DYI2 1134 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 PPFIA4O75335 1185 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 PFKMP08237 780 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 HMGB1P09429 215 aaKnown RBP22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 HOXD8P13378 290 aaPredicted RBP22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 ICAM3P32942 547 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 SP4Q02446 784 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 WWC2Q6AWC2 1192 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 DHX38Q92620 1227 aaKnown RBP22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 FTOQ9C0B1 505 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 SNX14Q9Y5W7 946 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 SLC4A7Q9Y6M7 1214 aa22.15■■□□□ 1.14
CCHCR1-210ENST00000464012 SPDYE3A6NKU9 549 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 LGALS2P05162 132 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 HSPA4P34932 840 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 RFC2P35250 354 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 NAPAP54920 295 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 ZNF200P98182 395 aaPredicted RBP22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 APOBRQ0VD83 1088 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 NEDD9Q14511 834 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 NLRX1Q86UT6 975 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 CAGE1Q8TC20 777 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 ZNF576Q9H609 170 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 MSRAQ9UJ68 235 aa22.14■■□□□ 1.13
CCHCR1-210ENST00000464012 KAT6AQ92794 2004 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 FOSL2P15408 326 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 CDC27P30260 824 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 RABGGTBP53611 331 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 GRIN2CQ14957 1233 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 XRRA1Q6P2D8 792 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 BLOC1S2Q6QNY1 142 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 METTL7BQ6UX53 244 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 Q6ZUG5 572 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 AFAP1L1Q8TED9 768 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 C16orf70Q9BSU1 422 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 NKX2-4Q9H2Z4 354 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 PCDHA6Q9UN73 950 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 PCDHA8Q9Y5H6 950 aa22.13■■□□□ 1.13
CCHCR1-210ENST00000464012 REC8O95072 547 aa22.12■■□□□ 1.13
CCHCR1-210ENST00000464012 ACTN1P12814 892 aa22.12■■□□□ 1.13
CCHCR1-210ENST00000464012 FUT2Q10981 343 aa22.12■■□□□ 1.13
CCHCR1-210ENST00000464012 RAB30Q15771 203 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms