RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 TMEM39AQ9NV64 488 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 TMEM260Q9NX78 707 aa20.3■□□□□ 0.84
SF1-212ENST00000463343 SYNRGQ9UMZ2 1314 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 FDPSP14324 419 aaKnown RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 CLK2P49760 499 aaKnown RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 GJA9P57773 515 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 MRPS9P82933 396 aaKnown RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 FPGSQ05932 587 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 FAAP100Q0VG06 881 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 MAFAQ8NHW3 353 aaPredicted RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
SF1-212ENST00000463343 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
SF1-212ENST00000463343 MROH7Q68CQ1 1323 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 PRUNE2Q8WUY3 3088 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 MYADML2A6NDP7 307 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 SPDYE3A6NKU9 549 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 CTAGE5O15320 804 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 PQBP1O60828 265 aaKnown RBP20.28■□□□□ 0.84
SF1-212ENST00000463343 ARIH2O95376 493 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 CDK7P50613 346 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 EPHB4P54760 987 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 NKX3-2P78367 333 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 KCNA10Q16322 511 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 PCSK9Q8NBP7 692 aaKnown RBP20.28■□□□□ 0.84
SF1-212ENST00000463343 NSUN7Q8NE18 718 aaKnown RBP20.28■□□□□ 0.84
SF1-212ENST00000463343 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
SF1-212ENST00000463343 ORC3Q9UBD5 711 aaPredicted RBP20.28■□□□□ 0.84
SF1-212ENST00000463343 Q9Y3F1 56 aa20.28■□□□□ 0.84
SF1-212ENST00000463343 STK36Q9NRP7 1315 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 LRRC37A2A6NM11 1700 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.27■□□□□ 0.84
SF1-212ENST00000463343 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.27■□□□□ 0.84
SF1-212ENST00000463343 ST18O60284 1047 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 CD2BP2O95400 341 aaKnown RBP20.27■□□□□ 0.84
SF1-212ENST00000463343 TIMP1P01033 207 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 FOSP01100 380 aaPredicted RBP20.27■□□□□ 0.84
SF1-212ENST00000463343 TXNP10599 105 aaKnown RBP20.27■□□□□ 0.84
SF1-212ENST00000463343 GNA11P29992 359 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 TTLL4Q14679 1199 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 JAKMIP3Q5VZ66 844 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 PCNX4Q63HM2 1172 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 CCDC148Q8NFR7 591 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 COPS5Q92905 334 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 PGBD1Q96JS3 809 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 GLT1D1Q96MS3 346 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 RTEL1Q9NZ71 1219 aa20.27■□□□□ 0.84
SF1-212ENST00000463343 EYSQ5T1H1 3165 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 JAK2O60674 1132 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 C6orf222P0C671 652 aaPredicted RBP20.26■□□□□ 0.83
SF1-212ENST00000463343 NLRP5P59047 1200 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 XRRA1Q6P2D8 792 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 TLK2Q86UE8 772 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 AP5M1Q9H0R1 490 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 SPC25Q9HBM1 224 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
SF1-212ENST00000463343 DDX41Q9UJV9 622 aaKnown RBP20.26■□□□□ 0.83
SF1-212ENST00000463343 TBX21Q9UL17 535 aa20.26■□□□□ 0.83
SF1-212ENST00000463343 NKRFO15226 690 aaKnown RBP eCLIP20.25■□□□□ 0.832e-6■■■□□ 17.1
SF1-212ENST00000463343 STAM2O75886 525 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 BEX3Q00994 111 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 AP3B2Q13367 1082 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 GNASQ5JWF2 1037 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 MYLIPQ8WY64 445 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 INPP4AQ96PE3 977 aaPredicted RBP20.25■□□□□ 0.83
SF1-212ENST00000463343 ANO3Q9BYT9 981 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 TTC28Q96AY4 2481 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 VCANP13611 3396 aa20.25■□□□□ 0.83
SF1-212ENST00000463343 NPY5RQ15761 445 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 FAM177A1Q8N128 213 aaPredicted RBP20.24■□□□□ 0.83
SF1-212ENST00000463343 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
SF1-212ENST00000463343 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 RASGRP4Q8TDF6 673 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 PCDHA4Q9UN74 947 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 KCNJ14Q9UNX9 436 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 UBIAD1Q9Y5Z9 338 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 CDH23Q9H251 3354 aa20.24■□□□□ 0.83
SF1-212ENST00000463343 SPATA31C2B4DYI2 1134 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 ICAM3P32942 547 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 SREBF1P36956 1147 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 SP2Q02086 613 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 SEMA3FQ13275 785 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 FSCN1Q16658 493 aaKnown RBP20.23■□□□□ 0.83
SF1-212ENST00000463343 MCTP2Q6DN12 878 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 KCNV1Q6PIU1 500 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 OR6J1Q8NGC5 347 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 WASF1Q92558 559 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
SF1-212ENST00000463343 EHMT1Q9H9B1 1298 aa20.23■□□□□ 0.83
SF1-212ENST00000463343 ARVCFO00192 962 aa20.22■□□□□ 0.83
SF1-212ENST00000463343 GH1P01241 217 aa20.22■□□□□ 0.83
SF1-212ENST00000463343 ASGR1P07306 291 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms