RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 X6R8D5 127 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 BLACEA4D250 179 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 H7BY64 318 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 K7ESM1 405 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 MSCO60682 206 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 EPHB3P54753 998 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 SUMO1P63165 101 aaKnown RBP5.71□□□□□ -1.5
KDM3A-208ENST00000463013 SLC9A5Q14940 896 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 ZNF827Q17R98 1081 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 ZC3H12BQ5HYM0 836 aaKnown RBP5.71□□□□□ -1.5
KDM3A-208ENST00000463013 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 STYK1Q6J9G0 422 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 KCNT2Q6UVM3 1135 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 DPH6Q7L8W6 267 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 LDHDQ86WU2 507 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 JMYQ8N9B5 988 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 MZB1Q8WU39 189 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 CHAMP1Q96JM3 812 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 ZFYVE21Q9BQ24 234 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 ZSWIM4Q9H7M6 989 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 SRRDQ9UH36 339 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
KDM3A-208ENST00000463013 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 IRS2Q9Y4H2 1338 aa5.71□□□□□ -1.5
KDM3A-208ENST00000463013 AKAP8O43823 692 aaKnown RBP5.7□□□□□ -1.5
KDM3A-208ENST00000463013 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 FBLN1P23142 703 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 SLC6A11P48066 632 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 HHIPL2Q6UWX4 724 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 IGDCC3Q8IVU1 814 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 SYT8Q8NBV8 401 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 THAP3Q8WTV1 239 aaPredicted RBP5.7□□□□□ -1.5
KDM3A-208ENST00000463013 MRFAP1L1Q96HT8 127 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 DHRS4Q9BTZ2 278 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 AP5M1Q9H0R1 490 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 ADAM7Q9H2U9 754 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 CLDND1Q9NY35 253 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 SIT1Q9Y3P8 196 aa5.7□□□□□ -1.5
KDM3A-208ENST00000463013 IRS4O14654 1257 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-208ENST00000463013 C6orf222P0C671 652 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-208ENST00000463013 NCKAP1LP55160 1127 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 GPR85P60893 370 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 ZXDAP98168 799 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 VMACQ2NL98 169 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 C2orf27AQ580R0 203 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 ZFYVE27Q5T4F4 411 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 NLGN1Q8N2Q7 840 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 LILRB2Q8N423 598 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.69□□□□□ -1.5
KDM3A-208ENST00000463013 SEC14L1Q92503 715 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 ALG3Q92685 438 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 KISS1RQ969F8 398 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-208ENST00000463013 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
KDM3A-208ENST00000463013 MRPS23Q9Y3D9 190 aaKnown RBP5.69□□□□□ -1.5
KDM3A-208ENST00000463013 ASXL2Q76L83 1435 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 SGSM2O43147 1006 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 PFKLP17858 780 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 IGFBP6P24592 240 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-208ENST00000463013 KCNC1P48547 511 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 TARBP2Q15633 366 aaKnown RBP5.68□□□□□ -1.5
KDM3A-208ENST00000463013 KIZQ2M2Z5 673 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 UBXN11Q5T124 520 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 MAMDC2Q7Z304 686 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-208ENST00000463013 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 ZSWIM2Q8NEG5 633 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 PTPRN2Q92932 1015 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 PWWP2AQ96N64 755 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 EPB41L1Q9H4G0 881 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 BCAS3Q9H6U6 928 aa5.68□□□□□ -1.5
KDM3A-208ENST00000463013 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-208ENST00000463013 ASGR2P07307 311 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 NCAM1P13591 858 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 GRK2P25098 689 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 PMLP29590 882 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 GRK3P35626 688 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 CHRNA2Q15822 529 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.67□□□□□ -1.5
KDM3A-208ENST00000463013 PIF1Q9H611 641 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-208ENST00000463013 PPARGC1AQ9UBK2 798 aaKnown RBP5.67□□□□□ -1.5
KDM3A-208ENST00000463013 TRAF6Q9Y4K3 522 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
KDM3A-208ENST00000463013 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 AQP7O14520 342 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 DGKIO75912 1065 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 ATF2P15336 505 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 GABREP78334 506 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 RTP5Q14D33 572 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 EMC4Q5J8M3 183 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 TMEFF1Q8IYR6 380 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 CPA5Q8WXQ8 436 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 ALG1Q9BT22 464 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 JAM3Q9BX67 310 aa5.66□□□□□ -1.5
KDM3A-208ENST00000463013 ZNF652Q9Y2D9 606 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms