RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 JADE2Q9NQC1 790 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 POLR3EQ9NVU0 708 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 BTBD18B2RXH4 712 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 CABYRO75952 493 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 FARP2O94887 1054 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 BAG4O95429 457 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 GGPS1O95749 300 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 SMPD1P17405 629 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 ICAM3P32942 547 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 SOX10P56693 466 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 GJA9P57773 515 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 MRPS9P82933 396 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 FSCN1Q16658 493 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 INF2Q27J81 1249 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 LETM2Q2VYF4 491 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 GNASQ5JWF2 1037 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 TAPT1Q6NXT6 567 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 NOSTRINQ8IVI9 506 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 TRPV1Q8NER1 839 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 IL31RAQ8NI17 732 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 TNPO1Q92973 898 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 VTI1AQ96AJ9 217 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 GLT1D1Q96MS3 346 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 SENP7Q9BQF6 1050 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 HTATIP2Q9BUP3 242 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 KATNBL1Q9H079 304 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 PDGFCQ9NRA1 345 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 DDX41Q9UJV9 622 aaKnown RBP7.24□□□□□ -1.25
SF3B1-206ENST00000462613 OGDHLQ9ULD0 1010 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 UBIAD1Q9Y5Z9 338 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 SYNRGQ9UMZ2 1314 aa7.24□□□□□ -1.25
SF3B1-206ENST00000462613 TCHHQ07283 1943 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 TRIP12Q14669 1992 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 POTEFA5A3E0 1075 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SPATA31C2B4DYI2 1134 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 M0R2N6 131 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 IPO5O00410 1097 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 CCNT1O60563 726 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 PGK1P00558 417 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 UBA1P22314 1058 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 CST5P28325 142 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 CIITAP33076 1130 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 TRAPPC10P48553 1259 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 NR5A1Q13285 461 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 ORC2Q13416 577 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 LRRC41Q15345 812 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 DGKDQ16760 1214 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 LY6KQ17RY6 165 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 PRR16Q569H4 304 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 RILPL1Q5EBL4 403 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 CELF3Q5SZQ8 465 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 LHX8Q68G74 356 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 METTL7BQ6UX53 244 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 BRAPQ7Z569 592 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SLFN12Q8IYM2 578 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SPATA33Q96N06 139 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 ZNF577Q9BSK1 485 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 KATNAL1Q9BW62 490 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SEZ6LQ9BYH1 1024 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 CRISPLD2Q9H0B8 497 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 UPF3AQ9H1J1 476 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 KCNH7Q9NS40 1196 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 GJB4Q9NTQ9 266 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 TBC1D22BQ9NU19 505 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 FOXD4L1Q9NU39 408 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SLC9A2Q9UBY0 812 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 DDX25Q9UHL0 483 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 GNEQ9Y223 722 aaKnown RBP7.23□□□□□ -1.25
SF3B1-206ENST00000462613 NFASCO94856 1347 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 MROH7Q68CQ1 1323 aa7.23□□□□□ -1.25
SF3B1-206ENST00000462613 SCN10AQ9Y5Y9 1956 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 EVPLQ92817 2033 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 MEIS1O00470 390 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 TBX3O15119 743 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 STX6O43752 255 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 NEMFO60524 1076 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 GAS7O60861 476 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 DTNBO60941 627 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ADAMTS4O75173 837 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 CAPN15O75808 1086 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 MYL3P08590 195 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ITGB5P18084 799 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 EN2P19622 333 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 ATP2B1P20020 1258 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 KRT76Q01546 638 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 NPY5RQ15761 445 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 GJC2Q5T442 439 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-206ENST00000462613 LRCH2Q5VUJ6 765 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 MYSM1Q5VVJ2 828 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 PPP4R3AQ6IN85 833 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 CYFIP1Q7L576 1253 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 PPTC7Q8NI37 304 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 OXER1Q8TDS5 423 aa7.22□□□□□ -1.25
SF3B1-206ENST00000462613 SEPT1Q8WYJ6 367 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms