RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TDP2O95551 362 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 GNAQP50148 359 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 SEMA3FQ13275 785 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 UNC13DQ70J99 1090 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 RUBCNQ92622 972 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 PIGSQ96S52 555 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 MYO1FO00160 1098 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 EDIL3O43854 480 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 ECM1Q16610 540 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 CFAP221Q4G0U5 840 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 GALNT17Q6IS24 598 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 MAPKAPK5Q8IW41 473 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 TBC1D7Q9P0N9 293 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-203ENST00000462146 RASA1P20936 1047 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 SEC24CP53992 1094 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 FAM107BQ9H098 131 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 EHHADHQ08426 723 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 SUGP1Q8IWZ8 645 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 IFT20Q8IY31 132 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 DDX12PQ92771 950 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 LSM14BQ9BX40 385 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 LSP1P33241 339 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 PPP1R2P41236 205 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 POLR2FP61218 127 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 IRX3P78415 501 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 CALCRLQ16602 461 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 CCDC84Q86UT8 332 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 KLHL7Q8IXQ5 586 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 C6orf50Q9HD87 102 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 MYH7BA7E2Y1 1941 aa12.95□□□□□ -0.34
PDZRN3-203ENST00000462146 SNED1Q8TER0 1413 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 RAD51CO43502 376 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 NAA35Q5VZE5 725 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 COA7Q96BR5 231 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 A0A087X0T9 212 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 FAM228BP0C875 321 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 NR1D1P20393 614 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 OR2W6PQ8NHA6 318 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 SNX29Q8TEQ0 813 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 RAD54LQ92698 747 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-203ENST00000462146 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 RBAK-RBAKDNI3L0D1 243 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 PAK2Q13177 524 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 INPP4AQ96PE3 977 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 SPZ1Q9BXG8 430 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 TRAF5O00463 557 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 HPDP32754 393 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 LRRC63Q05C16 580 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 GLE1Q53GS7 698 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 SOGA3Q5TF21 947 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 FAM133AQ8N9E0 248 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 ZNF473Q8WTR7 871 aaKnown RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 PLAAQ9Y263 795 aa12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-203ENST00000462146 PVALEFA0A1B0GWK0 134 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 GRID2IPA4D2P6 1211 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 KCNQ2O43526 872 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 GNA11P29992 359 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 FNTAP49354 379 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 NAB2Q15742 525 aa12.92□□□□□ -0.34
PDZRN3-203ENST00000462146 MAATS1Q7Z4T9 603 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms