RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 LINC00271P0C7V0 271 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 MRPL12P52815 198 aaKnown RBP13.92□□□□□ -0.18
HCFC1-204ENST00000461098 GPM6BQ13491 265 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 PTPROQ16827 1216 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 TIGD5Q53EQ6 642 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
HCFC1-204ENST00000461098 TOP1MTQ969P6 601 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 SAMD11Q96NU1 681 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 MAF1Q9H063 256 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 TECTAO75443 2155 aa13.92□□□□□ -0.18
HCFC1-204ENST00000461098 EMSYQ7Z589 1322 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-204ENST00000461098 RGS20O76081 388 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 FGAP02671 866 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 HOXC8P31273 242 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 DLX2Q07687 328 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-204ENST00000461098 STXBP2Q15833 593 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 TTC14Q96N46 770 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
HCFC1-204ENST00000461098 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
HCFC1-204ENST00000461098 RSPH10B2B2RC85 870 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 RSPH10BP0C881 870 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 SMAD2Q15796 467 aaKnown RBP13.9□□□□□ -0.18
HCFC1-204ENST00000461098 HSDL1Q3SXM5 330 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-204ENST00000461098 RRP12Q5JTH9 1297 aaKnown RBP13.9□□□□□ -0.18
HCFC1-204ENST00000461098 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 CLDND1Q9NY35 253 aa13.9□□□□□ -0.18
HCFC1-204ENST00000461098 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
HCFC1-204ENST00000461098 OPLAHO14841 1288 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
HCFC1-204ENST00000461098 NR3C2P08235 984 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 THPOP40225 353 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 SP2Q02086 613 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 CDC37Q16543 378 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-204ENST00000461098 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
HCFC1-204ENST00000461098 IER5LQ5T953 404 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 RPAINQ86UA6 219 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
HCFC1-204ENST00000461098 PRSS33Q8NF86 280 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 YME1L1Q96TA2 773 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 MUTYHQ9UIF7 546 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 ABCB11O95342 1321 aa13.89□□□□□ -0.19
HCFC1-204ENST00000461098 C5orf67F2Z3F1 127 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 MBTPS2O43462 519 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
HCFC1-204ENST00000461098 HYAL1Q12794 435 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
HCFC1-204ENST00000461098 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
HCFC1-204ENST00000461098 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
HCFC1-204ENST00000461098 TREHO43280 583 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 SORBS3O60504 671 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 UPP2O95045 317 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 GTF2F1P35269 517 aaKnown RBP eCLIP13.87□□□□□ -0.19
HCFC1-204ENST00000461098 CLUL1Q15846 466 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
HCFC1-204ENST00000461098 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 EDAQ92838 391 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 HELLSQ9NRZ9 838 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 ZMYM6O95789 1325 aa13.87□□□□□ -0.19
HCFC1-204ENST00000461098 A0A0D9SFI3 127 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 GRM6O15303 877 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 NCK2O43639 380 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 TBX10O75333 385 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
HCFC1-204ENST00000461098 MX1P20591 662 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 HSD17B4P51659 736 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 HAND2P61296 217 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 GHRHRQ02643 423 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 QRICH1Q2TAL8 776 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 ZNF589Q86UQ0 364 aaPredicted RBP13.86□□□□□ -0.19
HCFC1-204ENST00000461098 MCF2L2Q86YR7 1114 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 SEPT8Q92599 483 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 GPKOWQ92917 476 aaPredicted RBP eCLIP13.86□□□□□ -0.19
HCFC1-204ENST00000461098 ATP6V0A1Q93050 837 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
HCFC1-204ENST00000461098 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms