RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 LY6KQ17RY6 165 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 DUSP28Q4G0W2 176 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 VSIG10LQ86VR7 867 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 KLHDC9Q8NEP7 349 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 OR6J1Q8NGC5 347 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 SCFD2Q8WU76 684 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 CCDC12Q8WUD4 166 aaPredicted RBP11.56□□□□□ -0.56
RFX3-210ENST00000457373 C6orf50Q9HD87 102 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 VPS54Q9P1Q0 977 aa11.56□□□□□ -0.56
RFX3-210ENST00000457373 ALPK3Q96L96 1907 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 SORBS3O60504 671 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 COL6A1P12109 1028 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 NLRP5P59047 1200 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 MRPS9P82933 396 aaKnown RBP11.55□□□□□ -0.56
RFX3-210ENST00000457373 RABEP1Q15276 862 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 AMHR2Q16671 573 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 GNASQ5JWF2 1037 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
RFX3-210ENST00000457373 CCDC148Q8NFR7 591 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 GTF3C6Q969F1 213 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 GLT8D2Q9H1C3 349 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 UPF3AQ9H1J1 476 aaKnown RBP11.55□□□□□ -0.56
RFX3-210ENST00000457373 EHMT1Q9H9B1 1298 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 Q9Y3F1 56 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
RFX3-210ENST00000457373 ADAMTS3O15072 1205 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 NKRFO15226 690 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFX3-210ENST00000457373 CTAGE5O15320 804 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 ZEB2O60315 1214 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 RGS20O76081 388 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 FOSP01100 380 aaPredicted RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 ASGR1P07306 291 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 GNA11P29992 359 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 ACLYP53396 1101 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 PCSK9Q8NBP7 692 aaKnown RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 TBC1D32Q96NH3 1257 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 ZMYND12Q9H0C1 365 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 DDX41Q9UJV9 622 aaKnown RBP11.54□□□□□ -0.56
RFX3-210ENST00000457373 PHF24Q9UPV7 400 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
RFX3-210ENST00000457373 DOCK5Q9H7D0 1870 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 MOXD2PA6NHM9 499 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 ST18O60284 1047 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 EVI5O60447 810 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 STAM2O75886 525 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 GH1P01241 217 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 MYL3P08590 195 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
RFX3-210ENST00000457373 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
RFX3-210ENST00000457373 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 FSCN1Q16658 493 aaKnown RBP11.53□□□□□ -0.56
RFX3-210ENST00000457373 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 CCSAPQ6IQ19 270 aaPredicted RBP11.53□□□□□ -0.56
RFX3-210ENST00000457373 CCDC62Q6P9F0 684 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 SLC39A5Q6ZMH5 540 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 NLRX1Q86UT6 975 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 PARP9Q8IXQ6 854 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
RFX3-210ENST00000457373 C7orf61Q8IZ16 206 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 RASGRP4Q8TDF6 673 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 STARD7Q9NQZ5 370 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 STK36Q9NRP7 1315 aa11.53□□□□□ -0.56
RFX3-210ENST00000457373 A0A1W2PQ45 241 aaPredicted RBP11.52□□□□□ -0.57
RFX3-210ENST00000457373 A0A1W2PQY0 241 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 JAK2O60674 1132 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 FDPSP14324 419 aaKnown RBP11.52□□□□□ -0.57
RFX3-210ENST00000457373 ZNF76P36508 570 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 CPT1AP50416 773 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 FOSBP53539 338 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 RTP1P59025 263 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 NKX3-2P78367 333 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 XRRA1Q6P2D8 792 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 CXCL17Q6UXB2 119 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 NSUN7Q8NE18 718 aaKnown RBP11.52□□□□□ -0.57
RFX3-210ENST00000457373 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 WASF1Q92558 559 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 GLT1D1Q96MS3 346 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 ALG1Q9BT22 464 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
RFX3-210ENST00000457373 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.57
RFX3-210ENST00000457373 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms