RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GOLGA8HP0CJ92 632 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 IRS1P35568 1242 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 ADHFE1Q8IWW8 467 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 PPTC7Q8NI37 304 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 SNX27Q96L92 541 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 PHOX2BQ99453 314 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 KATNAL1Q9BW62 490 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 RALGAPA2Q2PPJ7 1873 aa20.17■□□□□ 0.82
UBE2D4-209ENST00000454428 FGAP02671 866 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 GPM6BQ13491 265 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 STXBP2Q15833 593 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 SERINC5Q86VE9 423 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 SAMD11Q96NU1 681 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 IWS1Q96ST2 819 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 UBA5Q9GZZ9 404 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 TOMM22Q9NS69 142 aa20.16■□□□□ 0.82
UBE2D4-209ENST00000454428 TMEM192Q8IY95 271 aa20.15■□□□□ 0.82
UBE2D4-209ENST00000454428 TOP1MTQ969P6 601 aa20.15■□□□□ 0.82
UBE2D4-209ENST00000454428 MAF1Q9H063 256 aa20.15■□□□□ 0.82
UBE2D4-209ENST00000454428 NSUN3Q9H649 340 aaKnown RBP20.15■□□□□ 0.82
UBE2D4-209ENST00000454428 EMSYQ7Z589 1322 aa20.15■□□□□ 0.82
UBE2D4-209ENST00000454428 SALL3Q9BXA9 1300 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 RSPH10B2B2RC85 870 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 RGS20O76081 388 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 RSPH10BP0C881 870 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 THPOP40225 353 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 DLX2Q07687 328 aaPredicted RBP20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 LAMC2Q13753 1193 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 CDC37Q16543 378 aaPredicted RBP20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 CTC1Q2NKJ3 1217 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 FBXO11Q86XK2 927 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 TTC14Q96N46 770 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 MYH6P13533 1939 aa20.14■□□□□ 0.81
UBE2D4-209ENST00000454428 ABCB11O95342 1321 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 EIF3JO75822 258 aaKnown RBP20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 LINC00271P0C7V0 271 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 EIF2AK2P19525 551 aaKnown RBP20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 HOXC8P31273 242 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 HSDL1Q3SXM5 330 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 MYSM1Q5VVJ2 828 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 RPAINQ86UA6 219 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 YME1L1Q96TA2 773 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 CLDND1Q9NY35 253 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 MUTYHQ9UIF7 546 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 MRVI1Q9Y6F6 885 aa20.13■□□□□ 0.81
UBE2D4-209ENST00000454428 NR3C2P08235 984 aa20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 SMAD2Q15796 467 aaKnown RBP20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 HERC4Q5GLZ8 1057 aaPredicted RBP20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 EP400NLQ6ZTU2 488 aa20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 TBC1D10CQ8IV04 446 aa20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 DHX37Q8IY37 1157 aaKnown RBP20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 C16orf70Q9BSU1 422 aa20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 FAM50BQ9Y247 325 aa20.12■□□□□ 0.81
UBE2D4-209ENST00000454428 OPLAHO14841 1288 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 SORBS3O60504 671 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 PPFIA4O75335 1185 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 UPP2O95045 317 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 MX1P20591 662 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 HAND2P61296 217 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 SP2Q02086 613 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 ARHGEF16Q5VV41 709 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 ADGRF4Q8IZF3 695 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 PRSS33Q8NF86 280 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 FAM227BQ96M60 508 aa20.11■□□□□ 0.81
UBE2D4-209ENST00000454428 ZMYM6O95789 1325 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 A0A0D9SFI3 127 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 MBTPS2O43462 519 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 HSPD1P10809 573 aaKnown RBP20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 HYAL1Q12794 435 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 CLUL1Q15846 466 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 QRICH1Q2TAL8 776 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 ZNF589Q86UQ0 364 aaPredicted RBP20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 MIER1Q8N108 512 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 MFSD14AQ96MC6 490 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 ZKSCAN3Q9BRR0 538 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 HELLSQ9NRZ9 838 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
UBE2D4-209ENST00000454428 C5orf67F2Z3F1 127 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 GRM6O15303 877 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 TREHO43280 583 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 TBX10O75333 385 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 IER5LQ5T953 404 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 MCF2L2Q86YR7 1114 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 RNF135Q8IUD6 432 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 SEPT8Q92599 483 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
UBE2D4-209ENST00000454428 NEDD4P46934 1319 aa20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 CTSHP09668 335 aa20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 HSD17B4P51659 736 aa20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 GHRHRQ02643 423 aa20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 ATP6V0A1Q93050 837 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms