RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 RBAK-RBAKDNI3L0D1 243 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 UBA1P22314 1058 aaKnown RBP21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 SMARCA1P28370 1054 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 CCND2P30279 289 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 BFSP2Q13515 415 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 CREB3L3Q68CJ9 461 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 KCNV1Q6PIU1 500 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
UBE2D4-208ENST00000454350 KAT6AQ92794 2004 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 PLEKHA8P1O95397 391 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 GGPS1O95749 300 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 TGFB3P10600 412 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 MCM5P33992 734 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 SEMA3FQ13275 785 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 MFSD10Q14728 455 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 SRBD1Q8N5C6 995 aaKnown RBP21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 RETREG2Q8NC44 543 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 PCDHA11Q9Y5I1 949 aa21.41■■□□□ 1.02
UBE2D4-208ENST00000454350 PRRC2BQ5JSZ5 2229 aaKnown RBP21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 MEIS2O14770 477 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 SORBS3O60504 671 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 ATP2A2P16615 1042 aaKnown RBP21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 ICAM3P32942 547 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 LIFRP42702 1097 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 KIAA0753Q2KHM9 967 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 TRIM71Q2Q1W2 868 aaKnown RBP21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 BMP2KLQ5H9B9 411 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 TRAF7Q6Q0C0 670 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 CAGE1Q8TC20 777 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 AFAP1L1Q8TED9 768 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 WNT8BQ93098 351 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 TMEM87BQ96K49 555 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 INPP4AQ96PE3 977 aaPredicted RBP21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 C16orf70Q9BSU1 422 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 NOD1Q9Y239 953 aa21.4■■□□□ 1.02
UBE2D4-208ENST00000454350 ZBBXA8MT70 800 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 CASC1Q6TDU7 716 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 CTCFLQ8NI51 663 aaPredicted RBP21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 SPATA33Q96N06 139 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 ALG1Q9BT22 464 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 KATNAL1Q9BW62 490 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 MICAL3Q7RTP6 2002 aa21.39■■□□□ 1.01
UBE2D4-208ENST00000454350 PIK3CDO00329 1044 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 CKBP12277 381 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 RXRAP19793 462 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 KIF5BP33176 963 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 ZNF200P98182 395 aaPredicted RBP21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 TCTN1Q2MV58 587 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 USP17L6PQ6QN14 398 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 CMTR1Q8N1G2 835 aaKnown RBP21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 TMTC2Q8N394 836 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 C7orf31Q8N865 590 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 RRP36Q96EU6 259 aaKnown RBP21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 TELO2Q9Y4R8 837 aa21.38■■□□□ 1.01
UBE2D4-208ENST00000454350 SPATA31C2B4DYI2 1134 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 NBNO60934 754 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 CXCL10P02778 98 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 SELPP16109 830 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 HOXC8P31273 242 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 LRRC8DQ7L1W4 858 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 LZTS2Q9BRK4 669 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 LRRC2Q9BYS8 371 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 ANO2Q9NQ90 1003 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 MUC3AQ02505 3323 aa21.37■■□□□ 1.01
UBE2D4-208ENST00000454350 NCOR1O75376 2440 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 STAM2O75886 525 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 ARHGEF15O94989 841 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 ACTN1P12814 892 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 GNAQP50148 359 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 PTK7Q13308 1070 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 MBTPS1Q14703 1052 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 SGMS1Q86VZ5 419 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 RAB11FIP4Q86YS3 637 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 PHOSPHO2Q8TCD6 241 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 SLC9A7Q96T83 725 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 GAS2L1Q99501 681 aaPredicted RBP21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 FTOQ9C0B1 505 aaKnown RBP eCLIP21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 PRDM6Q9NQX0 595 aa21.36■■□□□ 1.01
UBE2D4-208ENST00000454350 CCDC69A6NI79 296 aa21.35■■□□□ 1.01
UBE2D4-208ENST00000454350 PCNX4Q63HM2 1172 aa21.35■■□□□ 1.01
UBE2D4-208ENST00000454350 PPP2R2DQ66LE6 453 aa21.35■■□□□ 1.01
UBE2D4-208ENST00000454350 MLXIPQ9HAP2 919 aa21.35■■□□□ 1.01
UBE2D4-208ENST00000454350 RTEL1Q9NZ71 1219 aa21.35■■□□□ 1.01
UBE2D4-208ENST00000454350 hCG_1642624A0A1W2PR95 340 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 BAIAP3O94812 1187 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 LGALS2P05162 132 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 CA3P07451 260 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 GNPTABQ3T906 1256 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 ZNF618Q5T7W0 954 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 METTL7BQ6UX53 244 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 TMTC3Q6ZXV5 915 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 SERINC5Q86VE9 423 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 HERC6Q8IVU3 1022 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 FANCBQ8NB91 859 aa21.34■■□□□ 1.01
UBE2D4-208ENST00000454350 SIP14410 1827 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms