RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 THBDP07204 575 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 MED14OSP0DP75 135 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 PLS3P13797 630 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 TACR1P25103 407 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 MASP1P48740 699 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 CORO7P57737 925 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 DLG4P78352 724 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 SRSF3P84103 164 aaKnown RBP5.95□□□□□ -1.46
LINC00393-202ENST00000452852 CYP4F3Q08477 520 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 C2orf27AQ580R0 203 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 C16orf86Q6ZW13 317 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 TOX2Q96NM4 488 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 METTL14Q9HCE5 456 aaKnown RBP5.95□□□□□ -1.46
LINC00393-202ENST00000452852 GCM1Q9NP62 436 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 CD320Q9NPF0 282 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 PTCH2Q9Y6C5 1203 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 MAGI2Q86UL8 1455 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 ARHGAP35Q9NRY4 1499 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 ARHGAP5Q13017 1502 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 PLCH2O75038 1416 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 TRBV23OR9-2A0A075B6M9 112 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 A0A1W2PQJ5 194 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 ABLIM1O14639 778 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 PPP1R11O60927 126 aaPredicted RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 ASMTLO95671 621 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 SSRP1Q08945 709 aaKnown RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 SLC10A6Q3KNW5 377 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 BICRALQ6AI39 1079 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 RPTNQ6XPR3 784 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 ANKLE2Q86XL3 938 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 CILP2Q8IUL8 1156 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 ZSCAN18Q8TBC5 510 aaPredicted RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 THAP3Q8WTV1 239 aaPredicted RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 POLR3GLQ9BT43 218 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 EPN3Q9H201 632 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 SIRT5Q9NXA8 310 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 GULP1Q9UBP9 304 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 MBD1Q9UIS9 605 aaPredicted RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
LINC00393-202ENST00000452852 CCDC18Q5T9S5 1454 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 CDC42BPBQ9Y5S2 1711 aa5.94□□□□□ -1.46
LINC00393-202ENST00000452852 PCF11O94913 1555 aaKnown RBP5.93□□□□□ -1.46
LINC00393-202ENST00000452852 SCAPERQ9BY12 1400 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 C7orf72A4D263 438 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 TCAF2A6NFQ2 919 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 NPIPB6E9PJ23 425 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 SNRPB2P08579 225 aaKnown RBP5.93□□□□□ -1.46
LINC00393-202ENST00000452852 DBHP09172 617 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 HOXC12P31275 282 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 ECI1P42126 302 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 SF1Q15637 639 aaKnown RBP5.93□□□□□ -1.46
LINC00393-202ENST00000452852 KCNA10Q16322 511 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 PLEKHG6Q3KR16 790 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 EFCAB2Q5VUJ9 269 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 MBLAC2Q68D91 279 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 PAQR3Q6TCH7 311 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 TMC6Q7Z403 805 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 FRS2Q8WU20 508 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 STAG1Q8WVM7 1258 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 MMP19Q99542 508 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 FEZ1Q99689 392 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 DDX56Q9NY93 547 aaKnown RBP5.93□□□□□ -1.46
LINC00393-202ENST00000452852 FBLN5Q9UBX5 448 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
LINC00393-202ENST00000452852 PREX2Q70Z35 1606 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 TROQ12816 1431 aaPredicted RBP5.92□□□□□ -1.46
LINC00393-202ENST00000452852 ZNF518AQ6AHZ1 1483 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 CDC42BPAQ5VT25 1732 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 SIGLEC1Q9BZZ2 1709 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 AGRPO00253 132 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 SRGAP3O43295 1099 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 PARNO95453 639 aaKnown RBP5.92□□□□□ -1.46
LINC00393-202ENST00000452852 FAM153BP0C7A2 387 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 EPHB3P54753 998 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 NR1I3Q14994 352 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 INF2Q27J81 1249 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 PRSS53Q2L4Q9 553 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 LZTR1Q8N653 840 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 JMYQ8N9B5 988 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 CNTD2Q9H8S5 307 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 TMEFF2Q9UIK5 374 aaPredicted RBP5.92□□□□□ -1.46
LINC00393-202ENST00000452852 G3BP2Q9UN86 482 aaKnown RBP5.92□□□□□ -1.46
LINC00393-202ENST00000452852 JAG2Q9Y219 1238 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 HCFC2Q9Y5Z7 792 aa5.92□□□□□ -1.46
LINC00393-202ENST00000452852 PREX1Q8TCU6 1659 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 ITSN2Q9NZM3 1697 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 C9orf84Q5VXU9 1444 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 YEATS2Q9ULM3 1422 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 A0A1W2PQU0 124 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
LINC00393-202ENST00000452852 ARNTLO00327 626 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 NPHS1O60500 1241 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 CAPNS1P04632 268 aa5.91□□□□□ -1.46
LINC00393-202ENST00000452852 CYBBP04839 570 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms