RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NWD1Q149M9 1564 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 H0YIN7 160 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 SP4Q02446 784 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 NCAPHQ15003 741 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 ABCB5Q2M3G0 1257 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 KIAA0825Q8IV33 1275 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 KIFC2Q96AC6 838 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 ADAMTS1Q9UHI8 967 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 PDE6BP35913 854 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 GRIN1Q05586 938 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 UBE2SQ16763 222 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 PPP1R14CQ8TAE6 165 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 ZNF335Q9H4Z2 1342 aaPredicted RBP18.19■□□□□ 0.5
TCOF1-206ENST00000445265 HOMER3Q9NSC5 361 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 ANAPC4Q9UJX5 808 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 DOK7Q18PE1 504 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
TCOF1-206ENST00000445265 CCDC6Q16204 474 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 TEKT3Q9BXF9 490 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 K7ENM7 598 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 EDEM3Q9BZQ6 932 aa18.19■□□□□ 0.5
TCOF1-206ENST00000445265 TARSL2A2RTX5 802 aaKnown RBP18.18■□□□□ 0.5
TCOF1-206ENST00000445265 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 NEBLO76041 1014 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 SERPINB2P05120 415 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 MYCLP12524 364 aaPredicted RBP18.18■□□□□ 0.5
TCOF1-206ENST00000445265 SLC7A5Q01650 507 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 KCNG1Q9UIX4 513 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 STRN3Q13033 797 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 NNTQ13423 1086 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
TCOF1-206ENST00000445265 LRCH2Q5VUJ6 765 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 CPXCR1Q8N123 301 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 RAD54LQ92698 747 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 VSNL1P62760 191 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 PPP1R18Q6NYC8 613 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.18■□□□□ 0.5
TCOF1-206ENST00000445265 RIMBP3CA6NJZ7 1639 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 RIMBP3BA6NNM3 1639 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 RIMBP3Q9UFD9 1639 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 POTEMA6NI47 508 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 PPARDQ03181 441 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
TCOF1-206ENST00000445265 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 PCDHA6Q9UN73 950 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 PCDHA8Q9Y5H6 950 aa18.18■□□□□ 0.5
TCOF1-206ENST00000445265 RHOBTB3O94955 611 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 GYPCP04921 128 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 CYP2C19P33261 490 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 ALKBH5Q6P6C2 394 aaKnown RBP18.17■□□□□ 0.5
TCOF1-206ENST00000445265 NEDD1Q8NHV4 660 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 RSRC1Q96IZ7 334 aaKnown RBP18.17■□□□□ 0.5
TCOF1-206ENST00000445265 CHP1Q99653 195 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 HDAC6Q9UBN7 1215 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 H2AFXP16104 143 aaPredicted RBP18.17■□□□□ 0.5
TCOF1-206ENST00000445265 NTRK3Q16288 839 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 TTC19Q6DKK2 380 aaPredicted RBP18.17■□□□□ 0.5
TCOF1-206ENST00000445265 STAG2Q8N3U4 1231 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 SPZ1Q9BXG8 430 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 MYL7Q01449 175 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 GCNT4Q9P109 453 aa18.17■□□□□ 0.5
TCOF1-206ENST00000445265 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
TCOF1-206ENST00000445265 SRGNP10124 158 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 ILDR1Q86SU0 546 aaPredicted RBP18.16■□□□□ 0.5
TCOF1-206ENST00000445265 JDP2Q8WYK2 163 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 ANO3Q9BYT9 981 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 ATP1A1P05023 1023 aaKnown RBP18.16■□□□□ 0.5
TCOF1-206ENST00000445265 DLGAP5Q15398 846 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 NAA35Q5VZE5 725 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 CEP95Q96GE4 821 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 OSBPL9Q96SU4 736 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 CNTNAP5Q8WYK1 1306 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 RUNDC3BQ96NL0 473 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
TCOF1-206ENST00000445265 PPP1R3GB7ZBB8 358 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 CCDC188H7C350 402 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 MYO1CO00159 1063 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 CUL1Q13616 776 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 CAMTA2O94983 1202 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 HSPA6P17066 643 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 TROAPQ12815 778 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 TBC1D9BQ66K14 1250 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 ANKRD40Q6AI12 368 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 ADAT2Q7Z6V5 191 aaKnown RBP18.15■□□□□ 0.5
TCOF1-206ENST00000445265 MLXIPQ9HAP2 919 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms