RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 SOX4Q06945 474 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 KCNAB2Q13303 367 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 COL9A3Q14050 684 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 C8orf86Q6ZUL3 223 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 JADE3Q92613 823 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 TNIP3Q96KP6 325 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 SMOC1Q9H4F8 434 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 AS3MTQ9HBK9 375 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 CCM2LQ9NUG4 571 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 NRBP1Q9UHY1 535 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 M0R082 166 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 STXBP3O00186 592 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 LRRN2O75325 713 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 WISP1O95388 367 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 ZBTB48P10074 688 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 GRK2P25098 689 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 CTSKP43235 329 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 IREB2P48200 963 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 GTF2A2P52657 109 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 LACTBP83111 547 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 LONRF1Q17RB8 773 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 KIZQ2M2Z5 673 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 KIAA1211Q6ZU35 1233 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 C16orf59Q7L2K0 433 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 OVCH2Q7RTZ1 564 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 ZBTB34Q8NCN2 500 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF417Q8TAU3 575 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 FBXW5Q969U6 566 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 SGCZQ96LD1 299 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 PSMG3-AS1Q96PY0 264 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF587Q96SQ5 575 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 MIPEPQ99797 713 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 TRMT13Q9NUP7 481 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 FAM105AQ9NUU6 356 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 SPO11Q9Y5K1 396 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 BACE2Q9Y5Z0 518 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 DGKBQ9Y6T7 804 aa6.54□□□□□ -1.36
TM9SF3-202ENST00000443638 C2orf71A6NGG8 1288 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PRRT4C9JH25 899 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 DLL1O00548 723 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 SLC26A4O43511 780 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PRAMEF1O95521 474 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PPM1FP49593 454 aaPredicted RBP6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 DNM2P50570 870 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 POU4F1Q01851 419 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PDCD1Q15116 288 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 TUBB8Q3ZCM7 444 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 DUSP27Q5VZP5 1158 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 LILRA6Q6PI73 481 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF610Q8N9Z0 462 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 DIS3LQ8TF46 1054 aaKnown RBP6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 POF1BQ8WVV4 589 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 SSH1Q8WYL5 1049 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 MTA3Q9BTC8 594 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 DSCC1Q9BVC3 393 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 ZDHHC5Q9C0B5 715 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 TMEM60Q9H2L4 133 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 IPPKQ9H8X2 491 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PIDD1Q9HB75 910 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 CHST7Q9NS84 486 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 PCOLCE2Q9UKZ9 415 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 MINPP1Q9UNW1 487 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 ACTL7BQ9Y614 415 aa6.53□□□□□ -1.36
TM9SF3-202ENST00000443638 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 EXOC5O00471 708 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 DVL2O14641 736 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 GSNP06396 782 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 POU2F2P09086 479 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 PLS3P13797 630 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 NID1P14543 1247 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 LSP1P33241 339 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 SETQ01105 290 aaPredicted RBP6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 SEMA5AQ13591 1074 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 NUTM2GQ5VZR2 741 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 RCSD1Q6JBY9 416 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 LVRNQ6Q4G3 990 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 SKAP1Q86WV1 359 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 ZNF354CQ86Y25 554 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
TM9SF3-202ENST00000443638 CISD2Q8N5K1 135 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms