RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RPL6Q02878 288 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 FAM160A1Q05DH4 1040 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 PDE4BQ07343 736 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 EIF2B5Q13144 721 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 DDB1Q16531 1140 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 FXNQ16595 210 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 ANKRD45Q5TZF3 282 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 MORC1Q86VD1 984 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 BRSK2Q8IWQ3 736 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 CLASRPQ8N2M8 674 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 PAF1Q8N7H5 531 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 NEK9Q8TD19 979 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 PANK1Q8TE04 598 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 JDP2Q8WYK2 163 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 DHX38Q92620 1227 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 G6PC3Q9BUM1 346 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 MIR1-1HGQ9H1L0 117 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 DEF6Q9H4E7 631 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 CD248Q9HCU0 757 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 IFT57Q9NWB7 429 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 CLIC5Q9NZA1 410 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZNF69Q9UC07 566 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 DNMBPQ6XZF7 1577 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 SOGA1O94964 1423 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TMCO5BA8MYB1 307 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 KINO60870 393 aaKnown RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 HSPA5P11021 654 aaKnown RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 ENPP1P22413 925 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 EIF4BP23588 611 aaKnown RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 LTKP29376 864 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 GNA15P30679 374 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 PDE6BP35913 854 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 GSCP56915 257 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 SESN3P58005 492 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 IRX1P78414 480 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRAF1Q13077 416 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 RAPGEF1Q13905 1077 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRIM29Q14134 588 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 MLECQ14165 292 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 SNX17Q15036 470 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 PARP10Q53GL7 1025 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 CCDC158Q5M9N0 1113 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TCERG1LQ5VWI1 586 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TMEM132EQ6IEE7 984 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 WAPLQ7Z5K2 1190 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRIM74Q86UV6 250 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRIM73Q86UV7 250 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 SPPL2CQ8IUH8 684 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 HDAC7Q8WUI4 952 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 ATRIPQ8WXE1 791 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 JARID2Q92833 1246 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 ARMC5Q96C12 935 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 VMP1Q96GC9 406 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 CCDC34Q96HJ3 373 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 APBA2Q99767 749 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 VEZTQ9HBM0 779 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 ETAA1Q9NY74 926 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 CALCOCO1Q9P1Z2 691 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 IP6K2Q9UHH9 426 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 XPO7Q9UIA9 1087 aaKnown RBP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 BLOC1S6Q9UL45 172 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 KCNH3Q9ULD8 1083 aa5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB3P9-201ENST00000441799 NINLQ9Y2I6 1382 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 A0A1W2PRQ8 180 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 DYTNA2CJ06 578 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 E2F6O75461 281 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 IMPDH2P12268 514 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 HOXC13P31276 330 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 CASP2P42575 452 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 RIPK4P57078 832 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 TMEM95Q3KNT9 176 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZNF385BQ569K4 471 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 TMEM201Q5SNT2 666 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 JAZF1Q86VZ6 243 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 RBM12BQ8IXT5 1001 aaKnown RBP5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRIM6Q9C030 488 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 XPO4Q9C0E2 1151 aaKnown RBP5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 XYLT2Q9H1B5 865 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 QPCTLQ9NXS2 382 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 RABL2AQ9UBK7 228 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 GPR160Q9UJ42 338 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 ITM2BQ9Y287 266 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 TLR6Q9Y2C9 796 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 AK5Q9Y6K8 562 aa5.48□□□□□ -1.53
HMGB3P9-201ENST00000441799 GRIN2BQ13224 1484 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 PIK3R4Q99570 1358 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 BOLA2-SMG1P6H3BVE0 249 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 DYNC1I1O14576 645 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 TBX3O15119 743 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 CAND2O75155 1236 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 RAPGEF3O95398 923 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 PDGFRBP09619 1106 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 PLCG1P19174 1290 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 GNALP38405 381 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRAPPC10P48553 1259 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 RBM6P78332 1123 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms