RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ASB14A6NK59 587 aa23.83■■□□□ 1.41
VPS13B-204ENST00000441350 ECM2O94769 699 aaPredicted RBP23.83■■□□□ 1.41
VPS13B-204ENST00000441350 LONP1P36776 959 aaKnown RBP23.83■■□□□ 1.41
VPS13B-204ENST00000441350 MTMR1Q13613 665 aa23.83■■□□□ 1.41
VPS13B-204ENST00000441350 RESP18Q5W5W9 173 aa23.83■■□□□ 1.41
VPS13B-204ENST00000441350 GPT2Q8TD30 523 aa23.83■■□□□ 1.41
VPS13B-204ENST00000441350 TTC12Q9H892 705 aaPredicted RBP23.83■■□□□ 1.41
VPS13B-204ENST00000441350 KIAA1217Q5T5P2 1943 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 MAFGO15525 162 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 MARCH6O60337 910 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 PSMC4P43686 418 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 FCGRTP55899 365 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 NLRX1Q86UT6 975 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 IGSF22Q8N9C0 903 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 SOCS4Q8WXH5 440 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 TRIM47Q96LD4 638 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 UIMC1Q96RL1 719 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 NUDT12Q9BQG2 462 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 ARHGAP39Q9C0H5 1083 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 AGO4Q9HCK5 861 aaKnown RBP23.82■■□□□ 1.4
VPS13B-204ENST00000441350 SLC5A4Q9NY91 659 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 PCDHA12Q9UN75 941 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 MCM3APO60318 1980 aa23.82■■□□□ 1.4
VPS13B-204ENST00000441350 TECP42680 631 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 PDIA5Q14554 519 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 MAMDC4Q6UXC1 1216 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 NPLOC4Q8TAT6 608 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 MRPS27Q92552 414 aaKnown RBP23.81■■□□□ 1.4
VPS13B-204ENST00000441350 MAML3Q96JK9 1138 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 FAM237AA0A1B0GTK4 181 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 SPATA31C2B4DYI2 1134 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 IPO5O00410 1097 aaKnown RBP23.81■■□□□ 1.4
VPS13B-204ENST00000441350 MBD3O95983 291 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 ICAM3P32942 547 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 SEMA3FQ13275 785 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 TMEM266Q2M3C6 531 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 GNPTABQ3T906 1256 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 SPECC1Q5M775 1068 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 FSIP1Q8NA03 581 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 AK8Q96MA6 479 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 ZNF577Q9BSK1 485 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 GOLPH3LQ9H4A5 285 aa23.81■■□□□ 1.4
VPS13B-204ENST00000441350 GPR25O00155 361 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 PSMD10O75832 226 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 MAP2K1Q02750 393 aaPredicted RBP23.8■■□□□ 1.4
VPS13B-204ENST00000441350 SPIRE1Q08AE8 756 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 USP49Q70CQ1 688 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 ARMCX2Q7L311 632 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 CDHR1Q96JP9 859 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 RIT2Q99578 217 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 VAV3Q9UKW4 847 aa23.8■■□□□ 1.4
VPS13B-204ENST00000441350 DHX15O43143 795 aaKnown RBP23.79■■□□□ 1.4
VPS13B-204ENST00000441350 LIG1P18858 919 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 RGS2P41220 211 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 CAP1Q01518 475 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 LRCH2Q5VUJ6 765 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 MSL3Q8N5Y2 521 aaKnown RBP23.79■■□□□ 1.4
VPS13B-204ENST00000441350 EPSTI1Q96J88 318 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 HPSEQ9Y251 543 aa23.79■■□□□ 1.4
VPS13B-204ENST00000441350 A0A1B0GVL5 298 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 ITGB3BPQ13352 177 aaPredicted RBP23.78■■□□□ 1.4
VPS13B-204ENST00000441350 KIF22Q14807 665 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 SKOR2Q2VWA4 1001 aaPredicted RBP23.78■■□□□ 1.4
VPS13B-204ENST00000441350 DNAJC5GQ8N7S2 189 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 SYMPKQ92797 1274 aaKnown RBP23.78■■□□□ 1.4
VPS13B-204ENST00000441350 RAB34Q9BZG1 259 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 PCNTO95613 3336 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 SYNGAP1Q96PV0 1343 aa23.78■■□□□ 1.4
VPS13B-204ENST00000441350 TRAK2O60296 914 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 ATP9AO75110 1047 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 PFKFB1P16118 471 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 KLHL40Q2TBA0 621 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 SEPT14Q6ZU15 432 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 OTOP1Q7RTM1 612 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 ENGASEQ8NFI3 743 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 TINF2Q9BSI4 451 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 POTEMA6NI47 508 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 PP2D1A8MPX8 630 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 GAS7O60861 476 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 SNAI1O95863 264 aaPredicted RBP23.77■■□□□ 1.4
VPS13B-204ENST00000441350 NDUFA8P51970 172 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 FAM160A1Q05DH4 1040 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 PPP2R5CQ13362 524 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 B3GNT9Q6UX72 402 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 CCDC73Q6ZRK6 1079 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 APBA2Q99767 749 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 TBC1D22BQ9NU19 505 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 FAM13BQ9NYF5 915 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 LRWD1Q9UFC0 647 aa23.77■■□□□ 1.4
VPS13B-204ENST00000441350 IGHA2P01877 340 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 KCNA2P16389 499 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 CDC25AP30304 524 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 SNW1Q13573 536 aaKnown RBP23.76■■□□□ 1.39
VPS13B-204ENST00000441350 OLFML2BQ68BL8 750 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 EEPD1Q7L9B9 569 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 CCSER1Q9C0I3 900 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 KATNBL1Q9H079 304 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms