RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ZFP91Q96JP5 570 aaPredicted RBP21.3■■□□□ 1
AC004540.1-201ENST00000439120 MLXIPQ9HAP2 919 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 GTF2IRD1Q9UHL9 959 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 SLC12A7Q9Y666 1083 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 EYSQ5T1H1 3165 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 UNC80Q8N2C7 3258 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 STAM2O75886 525 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 F2P00734 622 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 KIAA0753Q2KHM9 967 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 BMP2KLQ5H9B9 411 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 AFAP1L1Q8TED9 768 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 PRDM12Q9H4Q4 367 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 HDAC6Q9UBN7 1215 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 PCDHA11Q9Y5I1 949 aa21.29■■□□□ 1
AC004540.1-201ENST00000439120 PPFIA4O75335 1185 aa21.28■■□□□ 1
AC004540.1-201ENST00000439120 UBA1P22314 1058 aaKnown RBP21.28■■□□□ 1
AC004540.1-201ENST00000439120 LIFRP42702 1097 aa21.28■■□□□ 1
AC004540.1-201ENST00000439120 RABGGTBP53611 331 aa21.28■■□□□ 1
AC004540.1-201ENST00000439120 PPP2R2DQ66LE6 453 aa21.28■■□□□ 1
AC004540.1-201ENST00000439120 YBX2Q9Y2T7 364 aaKnown RBP21.28■■□□□ 1
AC004540.1-201ENST00000439120 A0A0C4DFX4 3053 aa21.28■■□□□ 1
AC004540.1-201ENST00000439120 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
AC004540.1-201ENST00000439120 PLEKHA8P1O95397 391 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 SELPP16109 830 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 RXRAP19793 462 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 NECTIN1Q15223 517 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 HSDL1Q3SXM5 330 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 VWCEQ96DN2 955 aa21.27■■□□□ 1
AC004540.1-201ENST00000439120 TRIP12Q14669 1992 aaPredicted RBP21.27■□□□□ 0.99
AC004540.1-201ENST00000439120 PARNO95453 639 aaKnown RBP21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 SP2Q02086 613 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 LRRC8DQ7L1W4 858 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 CMTR1Q8N1G2 835 aaKnown RBP21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 SRBD1Q8N5C6 995 aaKnown RBP21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 SLC9A7Q96T83 725 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 LRRC2Q9BYS8 371 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 RTEL1Q9NZ71 1219 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
AC004540.1-201ENST00000439120 HAS3O00219 553 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 FIBPO43427 364 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 BAIAP3O94812 1187 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 HOXD8P13378 290 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 IGFBP4P22692 258 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 KCNJ6P48051 423 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 PTK7Q13308 1070 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 NEDD9Q14511 834 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 USP17L6PQ6QN14 398 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
AC004540.1-201ENST00000439120 KIF28PB7ZC32 967 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 PIK3CDO00329 1044 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 CKBP12277 381 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 MYOGP15173 224 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 MRPS9P82933 396 aaKnown RBP21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 PCNX4Q63HM2 1172 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 XRRA1Q6P2D8 792 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 PHOSPHO2Q8TCD6 241 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 PPM1EQ8WY54 764 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 INPP4AQ96PE3 977 aaPredicted RBP21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 CTAGE1Q96RT6 745 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 PSTPIP2Q9H939 334 aa21.24■□□□□ 0.99
AC004540.1-201ENST00000439120 SPATA31C2B4DYI2 1134 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 ICAM3P32942 547 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 RBL2Q08999 1139 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 METTL7BQ6UX53 244 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 NLRX1Q86UT6 975 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 FANCBQ8NB91 859 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 DHX38Q92620 1227 aaKnown RBP21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 NEK1Q96PY6 1258 aa21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 COL25A1Q9BXS0 654 aaPredicted RBP21.23■□□□□ 0.99
AC004540.1-201ENST00000439120 H3BRB1 525 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 MEIS2O14770 477 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 CDC45O75419 566 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 LGALS2P05162 132 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 COL9A3Q14050 684 aaPredicted RBP21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 CYFIP1Q7L576 1253 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 C16orf70Q9BSU1 422 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 USP26Q9BXU7 913 aa21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 TUT1Q9H6E5 874 aaKnown RBP21.22■□□□□ 0.99
AC004540.1-201ENST00000439120 hCG_1642624A0A1W2PR95 340 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 C17orf102A2RUQ5 167 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 CA3P07451 260 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 ZNF200P98182 395 aaPredicted RBP21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 SP4Q02446 784 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 CNKSR3Q6P9H4 555 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 TMTC3Q6ZXV5 915 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 SGMS1Q86VZ5 419 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 HERC6Q8IVU3 1022 aa21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 GIMAP8Q8ND71 665 aaPredicted RBP21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 ZNF215Q9UL58 517 aaPredicted RBP21.21■□□□□ 0.99
AC004540.1-201ENST00000439120 DOCK5Q9H7D0 1870 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 PRUNE2Q8WUY3 3088 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 SPDYE3A6NKU9 549 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 KRT32Q14532 448 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 USP38Q8NB14 1042 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms