RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 SYNE3Q6ZMZ3 975 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 RUFY3Q7L099 469 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 TEX2Q8IWB9 1127 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 SAMD3Q8N6K7 520 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 MTMR8Q96EF0 704 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 RIOX1Q9H6W3 641 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 RBM28Q9NW13 759 aaKnown RBP9.57□□□□□ -0.88
RPE-211ENST00000438265 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 COL4A6Q14031 1691 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 WDFY4Q6ZS81 3184 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 KLRF2D3W0D1 207 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 CA3P07451 260 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 MMP3P08254 477 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 IQCF3P0C7M6 154 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 TXNP10599 105 aaKnown RBP9.56□□□□□ -0.88
RPE-211ENST00000438265 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
RPE-211ENST00000438265 IGFBP4P22692 258 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 CHMP4BP1P59074 171 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 DEFB103AP81534 67 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 SP2Q02086 613 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 PDE4DQ08499 809 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 MBTPS1Q14703 1052 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 FAM47CQ5HY64 1035 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 CHST3Q7LGC8 479 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 MTG1Q9BT17 334 aaPredicted RBP9.56□□□□□ -0.88
RPE-211ENST00000438265 VAT1LQ9HCJ6 419 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 MAP3K20Q9NYL2 800 aaKnown RBP9.56□□□□□ -0.88
RPE-211ENST00000438265 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 ABCB11O95342 1321 aa9.56□□□□□ -0.88
RPE-211ENST00000438265 PLXNA4Q9HCM2 1894 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 ZBTB5O15062 677 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 CYTH3O43739 400 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 LPXNO60711 386 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 NBNO60934 754 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 ZNF286BP0CG31 522 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 EIF2AK2P19525 551 aaKnown RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 KCNQ1P51787 676 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 FGD1P98174 961 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 GHRHRQ02643 423 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 TAP1Q03518 808 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 TRIM71Q2Q1W2 868 aaKnown RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 ZNF713Q8N859 430 aaPredicted RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 DNERQ8NFT8 737 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 SCFD2Q8WU76 684 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 ADD3Q9UEY8 706 aaKnown RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
RPE-211ENST00000438265 SLC4A7Q9Y6M7 1214 aa9.55□□□□□ -0.88
RPE-211ENST00000438265 MYH9P35579 1960 aaKnown RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 ZBTB43O43298 467 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 ZEB2O60315 1214 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 HOXA13P31271 388 aaPredicted RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 RBM25P49756 843 aaKnown RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 CPT1AP50416 773 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 HSD17B4P51659 736 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 NFRKBQ6P4R8 1299 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 Q6ZUG5 572 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 TMTC3Q6ZXV5 915 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 MCF2L2Q86YR7 1114 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 FANCBQ8NB91 859 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.883e-8■■■■□ 21.2
RPE-211ENST00000438265 GAS2L1Q99501 681 aaPredicted RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 AMNQ9BXJ7 453 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 HDAC6Q9UBN7 1215 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 MSRAQ9UJ68 235 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 MRPL11Q9Y3B7 192 aaKnown RBP9.54□□□□□ -0.88
RPE-211ENST00000438265 PCDHA11Q9Y5I1 949 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 MTCH2Q9Y6C9 303 aa9.54□□□□□ -0.88
RPE-211ENST00000438265 FNDC1Q4ZHG4 1894 aaPredicted RBP9.53□□□□□ -0.88
RPE-211ENST00000438265 PNMA6FA0A0J9YX94 578 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 KLF18A0A0U1RQI7 1052 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 HAS3O00219 553 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
RPE-211ENST00000438265 CFBP00751 764 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 SEMA3FQ13275 785 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
RPE-211ENST00000438265 RAB30Q15771 203 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 PTGISQ16647 500 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 RTN1Q16799 776 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 MICU3Q86XE3 530 aa9.53□□□□□ -0.88
RPE-211ENST00000438265 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms