RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 RASSF4Q9H2L5 321 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ANKEF1Q9NU02 776 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 MRGBPQ9NV56 204 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 IFT80Q9P2H3 777 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 PCDHA4Q9UN74 947 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 MRFAP1Q9Y605 127 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ITIH6Q6UXX5 1313 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 A0A087WV62 115 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 DCDC2BA2VCK2 349 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SYNDIG1LA6NDD5 238 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GAS7O60861 476 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 EPXP11678 715 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 AKAP5P24588 427 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ADH6P28332 368 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 KRT20P35900 424 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 PIK3CBP42338 1070 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SFSWAPQ12872 951 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 IFIT5Q13325 482 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CCINQ13939 588 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 TBC1D10BQ4KMP7 808 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CCDC38Q502W7 563 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SLC45A4Q5BKX6 768 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 KIAA1614Q5VZ46 1190 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ALYREFQ86V81 257 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZSCAN18Q8TBC5 510 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 RPGRQ92834 1020 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SLC5A5Q92911 643 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 BRF1Q92994 677 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SEC62Q99442 399 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ITM2CQ9NQX7 267 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GGA3Q9NZ52 723 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GGA1Q9UJY5 639 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ACAD8Q9UKU7 415 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SHISA8B8ZZ34 492 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TIPRLO75663 272 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGHA1P01876 353 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 NFKB1P19838 968 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TNFSF4P23510 183 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SMARCA1P28370 1054 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 HOXC13P31276 330 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 GALNSP34059 522 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SOX18P35713 384 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SESN3P58005 492 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ROR1Q01973 937 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BTKQ06187 659 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TMEM201Q5SNT2 666 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZNF468Q5VIY5 522 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 PDZD4Q76G19 769 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 FASTKD5Q7L8L6 764 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 DDX53Q86TM3 631 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 COL23A1Q86Y22 540 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 NDUFAF2Q8N183 169 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 LSMEM1Q8N8F7 131 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BVESQ8NE79 360 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 GPBAR1Q8TDU6 330 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 JADE3Q92613 823 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 PPP1R16BQ96T49 567 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CERS4Q9HA82 394 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 DMRT3Q9NQL9 472 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CYP26B1Q9NR63 512 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CACNA2D2Q9NY47 1150 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 MKL2Q9ULH7 1088 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TISP43B9A030 160 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 B9A039 149 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 AREL1O15033 823 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 KPNA5O15131 536 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 TUSC2O75896 110 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGHDP01880 384 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 CD33P20138 364 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 PEX2P28328 305 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATICP31939 592 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 HOXD12P35452 270 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 UBA7P41226 1012 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 GPR3P46089 330 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 KPNA1P52294 538 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 GFRA1P56159 465 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 PFKPQ01813 784 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 WASHC5Q12768 1159 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms