RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 RASSF4Q9H2L5 321 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ANKEF1Q9NU02 776 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 MRGBPQ9NV56 204 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 IFT80Q9P2H3 777 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 PCDHA4Q9UN74 947 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 MRFAP1Q9Y605 127 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
HMGB3P10-201ENST00000434734 ITIH6Q6UXX5 1313 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 A0A087WV62 115 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 DCDC2BA2VCK2 349 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SYNDIG1LA6NDD5 238 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GAS7O60861 476 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 EPXP11678 715 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 AKAP5P24588 427 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ADH6P28332 368 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 KRT20P35900 424 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 PIK3CBP42338 1070 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SFSWAPQ12872 951 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 IFIT5Q13325 482 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CCINQ13939 588 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 TBC1D10BQ4KMP7 808 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CCDC38Q502W7 563 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SLC45A4Q5BKX6 768 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 KIAA1614Q5VZ46 1190 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ALYREFQ86V81 257 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZSCAN18Q8TBC5 510 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 RPGRQ92834 1020 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SLC5A5Q92911 643 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 BRF1Q92994 677 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 SEC62Q99442 399 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ITM2CQ9NQX7 267 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GGA3Q9NZ52 723 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 GGA1Q9UJY5 639 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ACAD8Q9UKU7 415 aa6.26□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SHISA8B8ZZ34 492 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TIPRLO75663 272 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGHA1P01876 353 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 NFKB1P19838 968 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TNFSF4P23510 183 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SMARCA1P28370 1054 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 HOXC13P31276 330 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 GALNSP34059 522 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SOX18P35713 384 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 SESN3P58005 492 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ROR1Q01973 937 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BTKQ06187 659 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TMEM201Q5SNT2 666 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZNF468Q5VIY5 522 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 PDZD4Q76G19 769 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 FASTKD5Q7L8L6 764 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 DDX53Q86TM3 631 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 COL23A1Q86Y22 540 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 NDUFAF2Q8N183 169 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 LSMEM1Q8N8F7 131 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 BVESQ8NE79 360 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 GPBAR1Q8TDU6 330 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 JADE3Q92613 823 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 PPP1R16BQ96T49 567 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CERS4Q9HA82 394 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 DMRT3Q9NQL9 472 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CYP26B1Q9NR63 512 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CACNA2D2Q9NY47 1150 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 MKL2Q9ULH7 1088 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
HMGB3P10-201ENST00000434734 TISP43B9A030 160 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 B9A039 149 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 AREL1O15033 823 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 KPNA5O15131 536 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 TUSC2O75896 110 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 IGHDP01880 384 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 CD33P20138 364 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 PEX2P28328 305 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATICP31939 592 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 HOXD12P35452 270 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 UBA7P41226 1012 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 GPR3P46089 330 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 KPNA1P52294 538 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 GFRA1P56159 465 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 PFKPQ01813 784 aa6.24□□□□□ -1.41
HMGB3P10-201ENST00000434734 WASHC5Q12768 1159 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms